Evidence map›Paper›PMID 16423886›Full record

ArticleGut2006

Lack of association of MYO9B genetic variants with coeliac disease in a British cohort.

K A Hunt, A J Monsuur, W L McArdle, P J Kumar, S P L Travis, J R F Walters, D P Jewell, D P Strachan, R J Playford, C Wijmenga and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Gut, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Review
  3. The intestinal epithelial barrier: a therapeutic target?Nature reviews. Gastroenterology & hepatology · 2017
    Review
  4. Association between the MYO9B polymorphisms and celiac disease risk: a meta-analysis.International journal of clinical and experimental medicine · 2015
    Article
  5. Article
  6. The myosin superfamily at a glance.Journal of cell science · 2012
    Review
  7. Gliadin fragments promote migration of dendritic cells.Journal of cellular and molecular medicine · 2011
    Article
  8. MYO9B polymorphisms in multiple sclerosis.European journal of human genetics : EJHG · 2009
    Article
  9. Immunopathogenesis of celiac disease.Current gastroenterology reports · 2008
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Celiac disease: pathogenesis of a model immunogenetic disease.The Journal of clinical investigation · 2007
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 2 countries.

K A HuntInstitute of Cell and Molecular Science, Barts and The London, Queen Mary's School of Medicine and Dentistry, Turner St, London E1 2AD, USA.
A J Monsuur
W L McArdle
P J Kumar
S P L Travis
J R F Walters
D P Jewell
D P Strachan
R J Playford
C Wijmenga
D A van Heel
Queen Mary University of London · GBJohn Radcliffe Hospital · GBUniversity Medical Center Utrecht · NLBarts Health NHS Trust · GBHammersmith Hospital · GBSt George's, University of London · GBUniversity of Bristol · GB

Funding

Medical Research Council G0000934Wellcome TrustWellcome Trust 068545/Z/02
6 · The paper itself

Abstract

BACKGROUND AND

aimsDevelopment of coeliac disease involves an interaction between environmental factors (especially dietary wheat, rye, and barley antigens) and genetic factors (there is strong inherited disease susceptibility). The known human leucocyte antigen (HLA)-DQ2 and -DQ8 association explains only a minority of disease heritability. A recent study in the Dutch population suggested that genetic variation in the 3' region of myosin IXB (MYO9B) predisposes to coeliac disease. MYO9B is a Rho family GTPase activating protein involved in epithelial cell cytoskeletal organisation. MYO9B is hypothesised to influence intestinal permeability and hence intestinal antigen presentation.

methodsFour single nucleotide polymorphisms were chosen to tag all common haplotypes of the MYO9B 3' haplotype block (exons 15-27). We genotyped 375 coeliac disease cases and 1366 controls (371 healthy and 995 population based). All individuals were of White UK Caucasian ethnicity.

resultsUK healthy control and population control allele frequencies were similar for all MYO9B variants. Case control analysis showed no significant association of any variant or haplotype with coeliac disease.

conclusionsGenetic variation in MYO9B does not have a major effect on coeliac disease susceptibility in the UK population. Differences between populations, a weaker effect size than originally described, or possibly a type I error in the Dutch study might explain these findings.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overCase-Control StudiesCeliac DiseaseChildChild, PreschoolChi-Square DistributionFemaleGene FrequencyGenetic Predisposition to DiseaseHaplotypesHumansMalemyosin IXBMyosins

Identifiers

PMID16423886
PMCPMC1856329
OpenAlexW2104173530

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.