Evidence map›Paper›PMID 16420472›Full record

ArticleThe FEBS journal2006

Gene duplication and separation of functions in alphaB-crystallin from zebrafish (Danio rerio).

Amber A Smith, Keith Wyatt, Jennifer Vacha, Thomas S Vihtelic, J S Zigler, Graeme J Wistow, Mason Posner

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The FEBS journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

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  15. Evolution of crystallins for a role in the vertebrate eye lens.Protein science : a publication of the Protein Society · 2013
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Amber A SmithDepartment of Biology, Ashland University, OH 44805, USA.
Keith Wyatt
Jennifer Vacha
Thomas S Vihtelic
J S Zigler
Graeme J Wistow
Mason Posner
Ashland University · USNational Eye Institute · USZero to Three · USUniversity of Notre Dame · US

Funding

Using zebrafish as a model system for investigating lens development, aging and cataract.R15EY013535 · NEI · ASHLAND UNIVERSITY · PI POSNER, MASON · 2001 to 2024
$1.3M
Identification of Lens Development GenesR01EY014455 · NEI · UNIVERSITY OF NOTRE DAME · PI VIHTELIC, THOMAS S · 2003 to 2007
$1.3M
ORIGINS, STRUCTURES AND FUNCTIONS OF CRYSTALLINSZ01EY000255 · NEI · NATIONAL EYE INSTITUTE · PI WISTOW, GRAEME J · 1990 to 2008
$1.3M
The Ocular Lens: Normal Biology and CataractogenesisZ01EY000105 · NEI · NATIONAL EYE INSTITUTE · PI ZIGLER, J. SAMUEL · 1985 to 2006
–
Intramural NIH HHS Z01 EY000255NEI NIH HHS R01 EY014455NEI NIH HHS R15 EY013535NEI NIH HHS R15 EY13535
6 · The paper itself

Abstract

We previously reported that zebrafish alphaB-crystallin is not constitutively expressed in nervous or muscular tissue and has reduced chaperone-like activity compared with its human ortholog. Here we characterize the tissue expression pattern and chaperone-like activity of a second zebrafish alphaB-crystallin. Expressed sequence tag analysis of adult zebrafish lens revealed the presence of a novel alpha-crystallin transcript designated cryab2 and the resulting protein alphaB2-crystallin. The deduced protein sequence was 58.2% and 50.3% identical with human alphaB-crystallin and zebrafish alphaB1-crystallin, respectively. RT-PCR showed that alphaB2-crystallin is expressed predominantly in lens but, reminiscent of mammalian alphaB-crystallin, also has lower constitutive expression in heart, brain, skeletal muscle and liver. The chaperone-like activity of purified recombinant alphaB2 protein was assayed by measuring its ability to prevent the chemically induced aggregation of alpha-lactalbumin and lysozyme. At 25 degrees C and 30 degrees C, zebrafish alphaB2 showed greater chaperone-like activity than human alphaB-crystallin, and at 35 degrees C and 40 degrees C, the human protein provided greater protection against aggregation. 2D gel electrophoresis indicated that alphaB2-crystallin makes up approximately 0.16% of total zebrafish lens protein. Zebrafish is the first species known to express two different alphaB-crystallins. Differences in primary structure, expression and chaperone-like activity suggest that the two zebrafish alphaB-crystallins perform divergent physiological roles. After gene duplication, zebrafish alphaB2 maintained the widespread protective role also found in mammalian alphaB-crystallin, while zebrafish alphaB1 adopted a more restricted, nonchaperone role in the lens. Gene duplication may have allowed these functions to separate, providing a unique model for studying structure-function relationships and the regulation of tissue-specific expression patterns.

Indexed as

Alternative SplicingGene Duplicationalpha-Crystallin B ChainAmino Acid SequenceAnimalsCloning, MolecularElectrophoresis, Gel, Two-DimensionalElectrophoresis, Polyacrylamide GelGene Expression RegulationHumansMolecular Sequence DataPhylogenyReverse Transcriptase Polymerase Chain ReactionSequence AlignmentTemperatureTime Factorsalpha-Crystallin B Chain

Identifiers

PMID16420472
PMCPMC2908480
OpenAlexW2037575741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.