Evidence map›Paper›PMID 16418485›Full record

ArticleGenes & development2006

Unconventional translation of mammalian LINE-1 retrotransposons.

Reid S Alisch, Jose L Garcia-Perez, Alysson R Muotri, Fred H Gage, John V Moran

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 196 citations in OpenAlex.

  1. Review
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  9. Review
  10. Approaches to repurposing reverse transcriptase antivirals in cancer.British journal of clinical pharmacology · 2025
    Review
  11. Article
  12. Article
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  18. Article
  19. Retrotransposons in embryogenesis and neurodevelopment.Biochemical Society transactions · 2024
    Review
  20. Article

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Reid S AlischDepartment of Human Genetics and Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109-0618, USA.
Jose L Garcia-Perez
Alysson R Muotri
Fred H Gage
John V Moran
University of Michigan–Ann Arbor · USSalk Institute for Biological Studies · US

Funding

Gen. &Mol. Analysis of Human LINE-1 RetrotranspositionR01GM060518 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1999 to 2024
$4.8M
smRNA-Mediated Regulation of Adult Neural Stem Cell FateR01NS052842 · NINDS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI GAGE, FRED H · 2005 to 2008
$2.6M
NIGMS NIH HHS GM60518NIGMS NIH HHS R01 GM060518NINDS NIH HHS NS052842NINDS NIH HHS R01 NS052842
6 · The paper itself

Abstract

Long Interspersed Element-1 (LINE-1 or L1) retrotransposons encode proteins required for their mobility (ORF1p and ORF2p), yet little is known about how L1 mRNA is translated. Here, we show that ORF2 translation generally initiates from the first in-frame methionine codon of ORF2, and that both ORF1 and the inter-ORF spacer are dispensable for ORF2 translation. Remarkably, changing the ORF2 AUG codon to any other coding triplet is compatible with retrotransposition. However, introducing a premature termination codon in ORF1 or a thermostable hairpin in the inter-ORF spacer reduces ORF2p translation or L1 retrotransposition to approximately 5% of wild-type levels. Similar data obtained from "natural" and codon optimized "synthetic" mouse L1s lead us to propose that ORF2 is translated by an unconventional termination/reinitiation mechanism.

Indexed as

AnimalsBase SequenceCodon, InitiatorCodon, TerminatorHeLa CellsHumansLong Interspersed Nucleotide ElementsMiceModels, GeneticMolecular Sequence DataOpen Reading FramesPeptide Chain Initiation, TranslationalRetroelementsCodon, InitiatorCodon, TerminatorRetroelements

Identifiers

PMID16418485
PMCPMC1356112
OpenAlexW2156847772

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.