Evidence map›Paper›PMID 16415342›Full record

ArticleThe Journal of biological chemistry2006

Requirement of the protein B23 for nucleolar disassembly induced by the FRGY2a family proteins.

Koichi Gonda, Justin Wudel, Dominic Nelson, Nobuko Katoku-Kikyo, Peter Reed, Hiroshi Tamada, Nobuaki Kikyo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
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  10. Critical role of nucleostemin in pre-rRNA processing.The Journal of biological chemistry · 2009
    Article
  11. Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Koichi GondaStem Cell Institute, Division of Hematology, Oncology and Transplantation, Department of Medicine, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Justin Wudel
Dominic Nelson
Nobuko Katoku-Kikyo
Peter Reed
Hiroshi Tamada
Nobuaki Kikyo
University of Minnesota · US

Funding

Reversible disassembly of the nucleolus by FRGY proteinsR01GM068027 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI KIKYO, NOBUAKI · 2003 to 2007
$1.7M
NIGMS NIH HHS R01 GM068027
6 · The paper itself

Abstract

In Xenopus somatic cell nuclear cloning, the nucleoli of donor nuclei rapidly and almost completely disappear in egg cytoplasm. We previously showed that the germ cell-specific proteins FRGY2a and FRGY2b were responsible for this unusually drastic nucleolar disassembly. The nucleolar disassembly occurs without inhibition of pre-rRNA transcription, a well known trigger for nucleolar segregation, and the mechanism for the nucleolar disassembly by FRGY2a and FRGY2b remains largely unknown. In this study, we searched for FRGY2a-interacting proteins and investigated the functional consequences of their interactions through a series of experiments. We showed that during the nucleolar disassembly, FRGY2a localized to the nucleoli of isolated nuclei and was capable of disassembling purified nucleoli, suggesting a direct interaction between FRGY2a and nucleolar components. Using a His tag pulldown approach, we identified the abundant and multifunctional nucleolar protein B23 as a potential target of FRGY2a and its related human protein YB1. A specific interaction between FRGY2a/YB1 and B23 was confirmed by co-immunoprecipitation. Finally, B23 knockdown using short interfering RNA and a subsequent add-back experiment confirmed that B23 was necessary for nucleolar disassembly by YB1. We propose that FRGY2a and YB1 disassemble nucleoli by sequestering B23, which is associated with pre-ribosomes and other structurally important nucleolar components.

Indexed as

AnimalsCell Line, TumorCell NucleolusCell NucleusCloning, MolecularDNA, ComplementaryHeLa CellsHistidineHumansImmunoprecipitationMass SpectrometryMicroscopy, ElectronMicroscopy, FluorescenceNuclear ProteinsNucleophosminProtein BindingDNA, ComplementaryHistidineNuclear ProteinsNucleophosminRecombinant ProteinsRNA-Binding ProteinsRNA, Small InterferingTranscription FactorsXenopus ProteinsYBX2 protein, Xenopus

Identifiers

PMID16415342
PMCPMC2222668
OpenAlexW2022469316

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.