Evidence map›Paper›PMID 16412225›Full record

ArticleRetrovirology2006

RTE and CTE mRNA export elements synergistically increase expression of unstable, Rev-dependent HIV and SIV mRNAs.

Sergey Smulevitch, Jenifer Bear, Candido Alicea, Margherita Rosati, Rashmi Jalah, Andrei S Zolotukhin, Agneta von Gegerfelt, Daniel Michalowski, Christoph Moroni, George N Pavlakis and 1 more

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. IFIH1 (MDA5) is required for innate immune detection of intron-containing RNA expressed from the HIV-1 provirus.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Sergey SmulevitchHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, MD 21702-1201, USA. smulevit@hotmail.com
Jenifer Bear
Candido Alicea
Margherita Rosati
Rashmi Jalah
Andrei S Zolotukhin
Agneta von Gegerfelt
Daniel Michalowski
Christoph Moroni
George N Pavlakis
Barbara K Felber
National Cancer Institute · USFrederick National Laboratory for Cancer Research · US

Funding

Immunotherapeutic Approaches for AIDSZIABC010749 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLAKIS, GEORGE N. · 2009 to 2022
$21.6M
Heterodimeric IL-15 in Cancer ImmunotherapyZIABC010750 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLAKIS, GEORGE N. · 2009 to 2022
$15.6M
Posttranscriptional control of gene expressionZIABC010334 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FELBER, BARBARA K · 2009 to 2025
$15.1M
DNA VaccinesZ01BC010749 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLAKIS, GEORGE N. · 2006 to 2008
$1.7M
Posttranscriptional control of gene expressionZ01BC010334 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FELBER, BARBARA K · 2000 to 2008
$1.6M
HIV Molecular Biology and Pathogenic Mechanisms of AIDSZ01BC010750 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLAKIS, GEORGE N. · 2006 to 2008
$919k
Pathogenic mech. of HIV, viral reservoirs /sanctuariesZ01BC010397 · BC · BASIC SCIENCES · PI PAVLAKIS, GEORGE N. · 2000 to 2005
–
Intramural NIH HHS
6 · The paper itself

Abstract

Studies of retroviral mRNA export identified two distinct RNA export elements utilizing conserved eukaryotic mRNA export mechanism(s), namely the Constitutive Transport Element (CTE) and the RNA Transport Element (RTE). Although RTE and CTE are potent in nucleocytoplasmic mRNA transport and expression, neither element is as powerful as the Rev-RRE posttranscriptional control. Here, we found that whereas CTE and the up-regulatory mutant RTEm26 alone increase expression from a subgenomic gag and env clones, the combination of these elements led to a several hundred-fold, synergistic increase. The use of the RTEm26-CTE combination is a simple way to increase expression of poorly expressed retroviral genes to levels otherwise only achieved via more cumbersome RNA optimization. The potent RTEm26-CTE element could be useful in lentiviral gene therapy vectors, DNA-based vaccine vectors, and gene transfer studies of other poorly expressed genes.

Indexed as

AnimalsBiological TransportCattleCell LineGene Products, revGenes, envGrowth HormoneHeLa CellsHIVHumansKidneyProtein Processing, Post-TranslationalRestriction Mappingrev Gene Products, Human Immunodeficiency VirusRNA, MessengerRNA Processing, Post-TranscriptionalGene Products, revGrowth Hormonerev Gene Products, Human Immunodeficiency VirusRNA, MessengerRNA, Viral

Identifiers

PMID16412225
PMCPMC1363727
OpenAlexW1511227065

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.