Evidence map›Paper›PMID 16407407›Full record

ArticleMolecular biology of the cell2006

Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins.

Rene P Zahedi, Albert Sickmann, Andreas M Boehm, Christiane Winkler, Nicole Zufall, Birgit Schönfisch, Bernard Guiard, Nikolaus Pfanner, Chris Meisinger

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 230 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Understanding coenzyme Q.Physiological reviews · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Isolation and Quality Control of Yeast Mitochondria.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  16. Article
  17. Subcellular Localization of Fad1p inLife (Basel, Switzerland) · 2021
    Article
  18. Review
  19. Article
  20. Protein Quality Control at the Mitochondrial Surface.Frontiers in cell and developmental biology · 2021
    Review

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Rene P ZahediRudolf-Virchow-Center for Experimental Biomedicine, Universität Würzburg, D-97078 Würzburg, Germany.
Albert Sickmann
Andreas M Boehm
Christiane Winkler
Nicole Zufall
Birgit Schönfisch
Bernard Guiard
Nikolaus Pfanner
Chris Meisinger
University of Würzburg · DEInstitute of Molecular Medicine · INCentre National de la Recherche Scientifique · FRUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondria consist of four compartments-outer membrane, intermembrane space, inner membrane, and matrix--with crucial but distinct functions for numerous cellular processes. A comprehensive characterization of the proteome of an individual mitochondrial compartment has not been reported so far. We used a eukaryotic model organism, the yeast Saccharomyces cerevisiae, to determine the proteome of highly purified mitochondrial outer membranes. We obtained a coverage of approximately 85% based on the known outer membrane proteins. The proteome represents a rich source for the analysis of new functions of the outer membrane, including the yeast homologue (Hfd1/Ymr110c) of the human protein causing Sjögren-Larsson syndrome. Surprisingly, a subclass of proteins known to reside in internal mitochondrial compartments were found in the outer membrane proteome. These seemingly mislocalized proteins included most top scorers of a recent genome-wide analysis for mRNAs that were targeted to mitochondria and coded for proteins of prokaryotic origin. Together with the enrichment of the precursor form of a matrix protein in the outer membrane, we conclude that the mitochondrial outer membrane not only contains resident proteins but also accumulates a conserved subclass of preproteins destined for internal mitochondrial compartments.

Indexed as

ProteomicsAldehyde OxidoreductasesAmino Acid SequenceElectrophoresis, Gel, Two-DimensionalGenome, FungalHumansMitochondriaMitochondrial MembranesMitochondrial ProteinsMolecular Sequence DataProtein PrecursorsRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSpectrometry, Mass, Electrospray IonizationTransport VesiclesAldehyde Oxidoreductaseslong-chain-aldehyde dehydrogenaseMitochondrial ProteinsProtein PrecursorsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID16407407
PMCPMC1382330
OpenAlexW2155890404

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.