Evidence map›Paper›PMID 16407306›Full record

ArticleThe Journal of biological chemistry2006

AtGAT1, a high affinity transporter for gamma-aminobutyric acid in Arabidopsis thaliana.

Andreas Meyer, Sepehr Eskandari, Silke Grallath, Doris Rentsch

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 145 citations in OpenAlex.

  1. Patch-Clamp- andPlant, cell & environment · 2025
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  6. GABA transport: beyond stress? A closer look at AtGAT2.Journal of experimental botany · 2024
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  20. Identification, Phylogenetic and Expression Analyses of theInternational journal of molecular sciences · 2022
    Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Andreas MeyerInstitute of Plant Sciences, University of Bern, Altenbergrain 21, 3013 Bern, Switzerland.
Sepehr Eskandari
Silke Grallath
Doris Rentsch
University of Bern · CHCalifornia State Polytechnic University · US

Funding

The Response of Choline and Folate Status to Controlled Levels of Choline IntakeS06GM053933 · NIGMS · CALIFORNIA STATE POLY U POMONA · PI CAUDILL, MARIE A · 1997 to 2007
$15.1M
NIGMS NIH HHS S06 GM053933NIGMS NIH HHS S06 GM 53933
6 · The paper itself

Abstract

Functional characterization of Arabidopsis thaliana GAT1 in heterologous expression systems, i.e. Saccharomyces cerevisiae and Xenopus laevis oocytes, revealed that AtGAT1 (At1g08230) codes for an H(+)-driven, high affinity gamma-aminobutyric acid (GABA) transporter. In addition to GABA, other omega-aminofatty acids and butylamine are recognized. In contrast to the most closely related proteins of the proline transporter family, proline and glycine betaine are not transported by AtGAT1. AtGAT1 does not share sequence similarity with any of the non-plant GABA transporters described so far, and analyses of substrate selectivity and kinetic properties showed that AtGAT1-mediated transport is similar but distinct from that of mammalian, bacterial, and S. cerevisiae GABA transporters. Consistent with a role in GABA uptake into cells, transient expression of AtGAT1/green fluorescent protein fusion proteins in tobacco protoplasts revealed localization at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence.

Indexed as

AnimalsArabidopsisArabidopsis ProteinsBetaineBinding, CompetitiveBiological TransportButylaminesCell MembraneCellular SenescenceChlorophyllDNAElectrophysiologyEscherichia coligamma-Aminobutyric AcidGene Expression Regulation, PlantGenetic Complementation TestArabidopsis ProteinsBetaineButylaminesChlorophyllDNAgamma-Aminobutyric AcidGAT1 protein, ArabidopsisGlycineGreen Fluorescent ProteinsMembrane Transport ProteinsProlineRNARNA, Messenger

Identifiers

PMID16407306
PMCPMC3009663
OpenAlexW2033016999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.