Evidence map›Paper›PMID 16407101›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Two types of cytotoxic lymphocyte regulation explain kinetics of immune response to human immunodeficiency virus.

I M Rouzine, R A Sergeev, A I Glushtsov

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Modeling the immune response to HIV infection.Current opinion in systems biology · 2018
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  8. Article
  9. Article
  10. Article
  11. Decay dynamics of HIV-1 depend on the inhibited stages of the viral life cycle.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

I M RouzineDepartment of Molecular Biology and Microbiology, Tufts University, 136 Harrison Avenue, Boston, MA 02111, USA. irouzine@tufts.edu
R A Sergeev
A I Glushtsov

Funding

SEARCH FOR WORKING MODELS OF HIV PERSISTENCE &EVOLUTIONK25AI001811 · NIAID · TUFTS UNIVERSITY BOSTON · PI ROUZINE, IGOR M · 2000 to 2004
$612k
NIAID NIH HHS K25 AI001811NIAID NIH HHS K25AI01811
6 · The paper itself

Abstract

The organization of the cytotoxic T lymphocyte (CTL) response at organismal level is poorly understood. We propose a mathematical model describing the interaction between HIV and its host that explains 20 quantitative observations made in HIV-infected individuals and simian immunodeficiency virus-infected monkeys, including acute infection and response to various antiretroviral therapy regimens. The model is built on two modes of CTL activation: direct activation by infected cells and indirect activation by CD4 helper cells activated by small amounts of virus. Effective infection of helper cells by virus leads to a stable chronic infection at high virus load. We assume that CTLs control virus by killing infected cells. We explain the lack of correlation between the CTL number and the virus decay rate in therapy and predict that individuals with a high virus load can be switched to a low-viremia state that will maintain stability after therapy, but the switch requires fine adjustment of therapy regimen based on the model and individual parameters.

Indexed as

AnimalsAnti-Retroviral AgentsCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesComputer SimulationHIVHIV InfectionsHumansKineticsLymphocyte ActivationMacaca mulattaModels, ImmunologicalSimian Immunodeficiency VirusT-Lymphocytes, CytotoxicAnti-Retroviral Agents

Identifiers

PMID16407101
PMCPMC1334670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.