Evidence map›Paper›PMID 16400180›Full record

ArticleEukaryotic cell2006

Deletion of RTS1, encoding a regulatory subunit of protein phosphatase 2A, results in constitutive amino acid signaling via increased Stp1p processing.

Nadine Eckert-Boulet, Katrin Larsson, Boqian Wu, Peter Poulsen, Birgitte Regenberg, Jens Nielsen, Morten C Kielland-Brandt

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nadine Eckert-BouletCarlsberg Laboratory, Gamle Carlsberg Vej 10, DK-2500 Copenhagen Valby, Denmark.
Katrin Larsson
Boqian Wu
Peter Poulsen
Birgitte Regenberg
Jens Nielsen
Morten C Kielland-Brandt
Carlsberg Laboratory · DKTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Saccharomyces cerevisiae, extracellular amino acids are sensed at the plasma membrane by the SPS sensor, consisting of the transporter homologue Ssy1p, Ptr3p, and the endoprotease Ssy5p. Amino acid sensing results in proteolytic truncation of the transcription factors Stp1p and Stp2p, followed by their relocation from the cytoplasm to the nucleus, where they activate transcription of amino acid permease genes. We screened a transposon mutant library for constitutively signaling mutants, with the aim of identifying down-regulating components of the SPS-mediated pathway. Three isolated mutants were carrying a transposon in the RTS1 gene, which encodes a regulatory subunit of protein phosphatase 2A. We investigated the basal activity of the AGP1 and BAP2 promoters in rts1delta cells and found increased transcription from these promoters, as well as increased Stp1p processing, even in the absence of amino acids. Based on our findings we propose that the phosphatase complex containing Rts1p keeps the SPS-mediated pathway down-regulated in the absence of extracellular amino acids by dephosphorylating a component of the pathway.

Indexed as

Gene DeletionSignal TransductionAmino AcidsAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralCitrullineEpistasis, GeneticGene Expression Regulation, FungalGenes, ReporterLeucineNuclear ProteinsPhosphoprotein PhosphatasesPromoter Regions, GeneticProtein Phosphatase 2Protein Processing, Post-TranslationalProtein SubunitsAGP1 protein, S cerevisiaeAmino AcidsAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralBAP2 protein, S cerevisiaeCitrullineLeucineNuclear ProteinsPhosphoprotein PhosphatasesProtein Phosphatase 2Protein SubunitsRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSTP1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID16400180
PMCPMC1360261
OpenAlexW2144137606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.