Evidence map›Paper›PMID 16400179›Full record

ArticleEukaryotic cell2006

Integration of transcriptional and posttranslational regulation in a glucose signal transduction pathway in Saccharomyces cerevisiae.

Jeong-Ho Kim, Valérie Brachet, Hisao Moriya, Mark Johnston

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Engineering of Pentose Transport inFrontiers in bioengineering and biotechnology · 2019
    Review
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  14. Article
  15. Enhanced production of 2,3-butanediol by engineeredBiotechnology for biofuels · 2016
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jeong-Ho KimDepartment of Genetics, Campus Box 8232, Washington University School of Medicine, 660 S. Euclid Avenue, St. Louis, Missouri 63110, USA.
Valérie Brachet
Hisao Moriya
Mark Johnston
Washington University in St. Louis · US

Funding

GLUCOSE SENSING AND SIGNALLING IN YEASTR01GM032540 · NIGMS · WASHINGTON UNIVERSITY · PI JOHNSTON, HENRY MARK · 1985 to 2017
$5.7M
NIGMS NIH HHS GM32540NIGMS NIH HHS R01 GM032540
6 · The paper itself

Abstract

Expression of the HXT genes encoding glucose transporters in the budding yeast Saccharomyces cerevisiae is regulated by two interconnected glucose-signaling pathways: the Snf3/Rgt2-Rgt1 glucose induction pathway and the Snf1-Mig1 glucose repression pathway. The Snf3 and Rgt2 glucose sensors in the membrane generate a signal in the presence of glucose that inhibits the functions of Std1 and Mth1, paralogous proteins that regulate the function of the Rgt1 transcription factor, which binds to the HXT promoters. It is well established that glucose induces degradation of Mth1, but the fate of its paralogue Std1 has been less clear. We present evidence that glucose-induced degradation of Std1 via the SCF(Grr1) ubiquitin-protein ligase and the 26S proteasome is obscured by feedback regulation of STD1 expression. Disappearance of Std1 in response to glucose is accelerated when glucose induction of STD1 expression due to feedback regulation by Rgt1 is prevented. The consequence of relieving feedback regulation of STD1 expression is that reestablishment of repression of HXT1 expression upon removal of glucose is delayed. In contrast, degradation of Mth1 is reinforced by glucose repression of MTH1 expression: disappearance of Mth1 is slowed when glucose repression of MTH1 expression is prevented, and this results in a delay in induction of HXT3 expression in response to glucose. Thus, the cellular levels of Std1 and Mth1, and, as a consequence, the kinetics of induction and repression of HXT gene expression, are closely regulated by interwoven transcriptional and posttranslational controls mediated by two different glucose-sensing pathways.

Indexed as

Gene Expression Regulation, FungalProtein Processing, Post-TranslationalSignal TransductionTranscription, GeneticAdaptor Proteins, Signal TransducingChromatinDNA-Binding ProteinsGlucoseGlucose Transport Proteins, FacilitativeIntracellular Signaling Peptides and ProteinsMembrane ProteinsMonosaccharide Transport ProteinsMutationPromoter Regions, GeneticRepressor ProteinsSaccharomyces cerevisiaeAdaptor Proteins, Signal TransducingChromatinDNA-Binding ProteinsGlucoseGlucose Transport Proteins, FacilitativeHXT3 protein, S cerevisiaeIntracellular Signaling Peptides and ProteinsMembrane ProteinsMonosaccharide Transport ProteinsMTH1 protein, S cerevisiaeRepressor ProteinsRGT1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSKP Cullin F-Box Protein LigasesSTD1 protein, S cerevisiaeTrans-ActivatorsTranscription FactorsUbiquitin

Identifiers

PMID16400179
PMCPMC1360249
OpenAlexW2146984904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.