Evidence map›Paper›PMID 16397796›Full record

ArticlePlanta2006

Rice ascorbate peroxidase gene family encodes functionally diverse isoforms localized in different subcellular compartments.

Felipe Karam Teixeira, Larissa Menezes-Benavente, Vinícius Costa Galvão, Rogério Margis, Márcia Margis-Pinheiro

Abstract read
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In one paragraph

Article in Planta, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 242 citations in OpenAlex.

  1. Dual Repression by IPA1 Fine-Tunes OsbZIP79-Mediated Salt Tolerance in Rice.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  16. Stromal Ascorbate Peroxidase (Antioxidants (Basel, Switzerland) · 2023
    Article
  17. Review
  18. Article
  19. Article
  20. Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Felipe Karam TeixeiraLaboratório de Genética Molecular Vegetal, Departamento de Genética, Universidade Federal do Rio de Janeiro, 21944-970, Rio de Janeiro, Brasil.
Larissa Menezes-Benavente
Vinícius Costa Galvão
Rogério Margis
Márcia Margis-Pinheiro
Universidade Federal do Rio de Janeiro · BRUniversidade Federal do Rio Grande do Sul · BRNorth Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aerobic organisms evolved a complex antioxidant system, which protect the cells against oxidative damage caused by partially reduced oxygen intermediates, also known as reactive oxygen species. In plants, ascorbate peroxidases (EC, 1.11.1.11) catalyze the conversion of H(2)O(2) to H(2)O, using ascorbate as the specific electron donor in this enzymatic reaction. Previously, eight APx genes were identified in the rice (Oryza sativa L.) genome through in silico analysis: two cytosolic isoforms, two putative peroxisomal isoforms, and four putative chloroplastic ones. Using gene-specific probes, we confirmed the presence of the eight APx genes in the rice genome by Southern blot hybridization. Transcript accumulation analysis showed specific expression patterns for each member of the APx family according to developmental stage and in response to salt stress, revealing the complexity of the antioxidant system in plants. Finally, the subcellular localization of rice APx isoforms was determined using GFP-fusion proteins in BY-2 tobacco cells. In agreement with the initial prediction, OSAPX3 was localized in the peroxisomes. On the other hand, the OSAPX6-GFP fusion protein was found in mitochondria of the BY-2 cells, in contrast to the chloroplastic location predicted by sequence analysis. Our findings reveal the functional diversity of the rice APx genes and suggest complementation and coordination of the antioxidant defenses in different cellular compartments during development and abiotic stress.

Indexed as

Ascorbate PeroxidasesBlotting, NorthernBlotting, SouthernFlowersGene Expression Regulation, PlantIsoenzymesNicotianaOryzaPeroxidasesPlant LeavesPlants, Genetically ModifiedPlant StemsProtein TransportRecombinant Fusion ProteinsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerAscorbate PeroxidasesIsoenzymesPeroxidasesRecombinant Fusion ProteinsRNA, MessengerSalts

Identifiers

PMID16397796
OpenAlexW2043781302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.