Evidence map›Paper›PMID 16391015›Full record

ArticleBlood2006

The PANE1 gene encodes a novel human minor histocompatibility antigen that is selectively expressed in B-lymphoid cells and B-CLL.

Anthony G Brickner, Anne M Evans, Jeffrey K Mito, Suzanne M Xuereb, Xin Feng, Tetsuya Nishida, Liane Fairfull, Robert E Ferrell, Kenneth A Foon, Donald F Hunt and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
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  8. Article
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  11. Article
  12. Review
  13. Upregulation of CENPM promotes hepatocarcinogenesis through mutiple mechanisms.Journal of experimental & clinical cancer research : CR · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Generation of MANAbodies specific to HLA-restricted epitopes encoded by somatically mutated genes.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Anthony G BricknerDepartment of Medicine, Unviersity of Pittsburgh School of Medicine, University of Pittsburgh Cancer Institute, PA, USA.
Anne M Evans
Jeffrey K Mito
Suzanne M Xuereb
Xin Feng
Tetsuya Nishida
Liane Fairfull
Robert E Ferrell
Kenneth A Foon
Donald F Hunt
Jeffrey Shabanowitz
Victor H Engelhard
Stanley R Riddell
Edus H Warren
Carter Center · US

Funding

VIRUS-MEDIATED MYELOSUPPRESSIONP01CA018029 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Geoffrey Roger HILL · 1985 to 2026
$128.4M
ANTIGENIC DETERMINANTS ON HLA-B7 AND -A2R01AI020963 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGELHARD, VICTOR H · 1985 to 2006
$1.8M
Allogeneic T Cell Responses Against Renal Cell CarcinomaR01CA106512 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI WARREN, EDUS HOUSTON · 2004 to 2008
$1.5M
IDENTIFICATION OF HUMAN MINOR H ANTIGEN PEPTIDES &GENESR01AI044134 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGELHARD, VICTOR H. · 1999 to 2003
$1.4M
ANTIGENIC DETERMINENTS ON HLA-B7 AND HLA-A2R37AI020963 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGELHARD, VICTOR H. · 1994 to 2001
$653k
NCI NIH HHS CA106512NCI NIH HHS CA18029NIAID NIH HHS AI20963NIAID NIH HHS AI339933NIAID NIH HHS AI44134
6 · The paper itself

Abstract

Minor histocompatibility antigens (mHAg's) are peptides encoded by polymorphic genes that are presented by major histocompatibility complex (MHC) molecules and recognized by T cells in recipients of allogeneic hematopoietic cell transplants. Here we report that an alternative transcript of the proliferation-associated nuclear element 1 (PANE1) gene encodes a novel human leukocyte antigen (HLA)-A(*)0301-restricted mHAg that is selectively expressed in B-lymphoid cells. The antigenic peptide is entirely encoded within a unique exon not present in other PANE1 transcripts. Sequencing of PANE1 alleles in mHAg-positive and mHAg-negative cells demonstrates that differential T-cell recognition is due to a single nucleotide polymorphism within the variant exon that replaces an arginine codon with a translation termination codon. The PANE1 transcript that encodes the mHAg is expressed at high levels in resting CD19(+) B cells and B-lineage chronic lymphocytic leukemia (B-CLL) cells, and at significantly lower levels in activated B cells. Activation of B-CLL cells through CD40 ligand (CD40L) stimulation decreases expression of the mHAg-encoding PANE1 transcript and reciprocally increases expression of PANE1 transcripts lacking the mHAg-encoding exon. These studies suggest distinct roles for different PANE1 isoforms in resting compared with activated CD19(+) cells, and identify PANE1 as a potential therapeutic target in B-CLL.

Indexed as

Minor Histocompatibility LociAlternative SplicingAmino Acid SequenceAntigens, CD19Base SequenceB-LymphocytesCell Cycle ProteinsDNAEpitopesGene ExpressionHLA-A3 AntigenHLA-A AntigensHumansLeukemia, Lymphocytic, Chronic, B-CellLymphocyte ActivationMinor Histocompatibility AntigensAntigens, CD19Cell Cycle ProteinsCENPM protein, humanDNAEpitopesHLA-A*03:01 antigenHLA-A3 AntigenHLA-A AntigensMinor Histocompatibility AntigensNuclear Proteins

Identifiers

PMID16391015
PMCPMC1895781
OpenAlexW2110050870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.