Evidence map›Paper›PMID 16390982›Full record

ArticleJournal of clinical microbiology2006

Diagnostic oligonucleotide microarray fingerprinting of Bacillus isolates.

Darrell P Chandler, Oleg Alferov, Boris Chernov, Don S Daly, Julia Golova, Alexander Perov, Miroslava Protic, Richard Robison, Matthew Schipma, Amanda White and 1 more

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Microarrays in infection and immunity.Current opinion in chemical biology · 2007
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Darrell P ChandlerArgonne National Laboratory, IL 60439, USA. dchandler@anl.gov
Oleg Alferov
Boris Chernov
Don S Daly
Julia Golova
Alexander Perov
Miroslava Protic
Richard Robison
Matthew Schipma
Amanda White
Alan Willse

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A genome-independent microarray and new statistical techniques were used to genotype Bacillus strains and quantitatively compare DNA fingerprints with the known taxonomy of the genus. A synthetic DNA standard was used to understand process level variability and lead to recommended standard operating procedures for microbial forensics and clinical diagnostics.

Indexed as

Bacterial Typing TechniquesBacillusDNA FingerprintingGenome, BacterialNucleic Acid HybridizationOligonucleotide Array Sequence AnalysisPhylogeny

Identifiers

PMID16390982
PMCPMC1351933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.