Evidence map›Paper›PMID 16390968›Full record

ArticleJournal of clinical microbiology2006

Long-term population-based genotyping study of Mycobacterium tuberculosis complex isolates in the French departments of the Americas.

Karine Brudey, Ingrid Filliol, Séverine Ferdinand, Vanina Guernier, Philippe Duval, Bertrand Maubert, Christophe Sola, Nalin Rastogi

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Isoniazid-resistant tuberculosis in children: a systematic review.The Pediatric infectious disease journal · 2013
    Pooled it
  3. Article
  4. Review
  5. Circulation ofPathogens and global health · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Genotyping of PulmonaryAmerican journal of microbiological research · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Karine BrudeyUnité de la tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Abymes, French Guiana.
Ingrid Filliol
Séverine Ferdinand
Vanina Guernier
Philippe Duval
Bertrand Maubert
Christophe Sola
Nalin Rastogi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The three French overseas departments of the Americas are characterized both by insular (Guadeloupe and Martinique) and continental (French Guiana) settings with a tuberculosis case detection rate that varies from less than 10 per 100,000 per year in insular areas to an estimated incidence of more than 55 per 100,000 in French Guiana. Under a long-term genotyping program, more than three-fourths of all the Mycobacterium tuberculosis isolates (n = 744) received from the three settings were fingerprinted over a 10-year period (1994 to 2003) by spoligotyping and variable number of tandem DNA repeats (VNTRs) in order to understand the current trends in their detection rates, drug resistance, and groups and subpopulations at risk of contracting the disease and to pinpoint the circulating phylogeographical clades of the bacilli. The major difference in the study populations was the nationality of the patients, with a high percentage of immigrants from high-incidence neighboring countries in French Guiana and a low but increasing percentage in the French Caribbean. The rate of recent transmission was calculated to be 49.3% in French Guiana, compared to 27.2% and 16.9% in Guadeloupe and Martinique, respectively. At the phylogeographic level, 77.9% of the isolates studied belonged to four major clades (Haarlem, Latin-American and Mediterranean, T, and X) which are already reported from neighboring Caribbean islands in an international database and may underline potential interregional transmission events.

Indexed as

Bacterial Typing TechniquesAdolescentAdultAgedAmericasChildChild, PreschoolDNA, BacterialEvolution, MolecularFemaleGenotypeGuadeloupeHumansInfantMaleMiddle AgedDNA, Bacterial

Identifiers

PMID16390968
PMCPMC1351934

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.