Evidence map›Paper›PMID 16387868›Full record

ArticleGenetics2006

Genetic analysis connects SLX5 and SLX8 to the SUMO pathway in Saccharomyces cerevisiae.

Zheng Wang, Grace Marie Jones, Gregory Prelich

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Function and regulation of SUMO proteases.Nature reviews. Molecular cell biology · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zheng WangDepartment of Molecular Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Grace Marie Jones
Gregory Prelich
Albert Einstein College of Medicine · US

Funding

GENETIC ANALYSIS OF BASAL TRANSCRIPTION IN YEASTR01GM052486 · NIGMS · YESHIVA UNIVERSITY · PI PRELICH, GREGORY · 1996 to 2009
$3.4M
NIGMS NIH HHS GM52486NIGMS NIH HHS R01 GM052486
6 · The paper itself

Abstract

MOT1 encodes an essential ATPase that functions as a general transcriptional regulator in vivo by modulating TATA-binding protein (TBP) DNA-binding activity. Although MOT1 was originally identified both biochemically and in several genetic screens as a transcriptional repressor, a combination of subsequent genetic, chromatin immunoprecipitation, and microarray analysis suggested that MOT1 might also have an additional role in vivo as a transcriptional activator. To better understand the role(s) of MOT1 in vivo, we selected for genomic suppressors of a mot1 temperature-sensitive mutation. This selection identified mutations in SPT15 (TBP) and BUR6, both of which are clearly linked with MOT1 at the functional level. The vast majority of the suppressor mutations, however, unexpectedly occurred in six genes that encode known components of the SUMO pathway and in two other genes with unknown functions, SLX5 and SLX8. Additional results presented here, including extensive synthetic lethality observed between slx5delta and slx8delta and SUMO pathway mutations, suggest that SLX5 and SLX8 are new components or regulators of the SUMO pathway and that SUMO modification might have a general role in transcriptional regulation as part of the TBP regulatory network.

Indexed as

Adenosine TriphosphatasesDNA-Binding ProteinsDNA HelicasesGene Expression Regulation, FungalMutationProtein Structure, TertiarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSmall Ubiquitin-Related Modifier ProteinsTATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTrans-ActivatorsTranscription, GeneticUbiquitin-Protein LigasesAdenosine TriphosphatasesDNA-Binding ProteinsDNA HelicasesMOT1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSlx5 protein, S cerevisiaeSlx8 protein, S cerevisiaeSmall Ubiquitin-Related Modifier ProteinsTATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTrans-ActivatorsUbiquitin-Protein Ligases

Identifiers

PMID16387868
PMCPMC1456262
OpenAlexW2124501260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.