Evidence map›Paper›PMID 16385458›Full record

ArticleAmerican journal of human genetics2006

Mutations in a novel isoform of TRIOBP that encodes a filamentous-actin binding protein are responsible for DFNB28 recessive nonsyndromic hearing loss.

Hashem Shahin, Tom Walsh, Tama Sobe, Judeh Abu Sa'ed, Amal Abu Rayan, Eric D Lynch, Ming K Lee, Karen B Avraham, Mary-Claire King, Moein Kanaan

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 2 pooled it
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 2 syntheses or guidelines pooled it, 124 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  11. ARNSHL gene identification: past, present and future.Molecular genetics and genomics : MGG · 2022
    Review
  12. Article
  13. Unbalanced bidirectional radial stiffness gradients within the organ of Corti promoted by TRIOBP.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  16. Review
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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Hashem ShahinDepartment of Life Sciences, Bethlehem University, Bethlehem.
Tom Walsh
Tama Sobe
Judeh Abu Sa'ed
Amal Abu Rayan
Eric D Lynch
Ming K Lee
Karen B Avraham
Mary-Claire King
Moein Kanaan
Bethlehem University · PSUniversity of Washington · USTel Aviv University · IL

Funding

Genetics of Hearing Loss in Middle Eastern FamiliesR01DC005641 · NIDCD · UNIVERSITY OF WASHINGTON · PI KING, MARY-CLAIRE · 2003 to 2010
$4.4M
NIDCD NIH HHS R01 DC005641
6 · The paper itself

Abstract

In a large consanguineous Palestinian kindred, we previously mapped DFNB28--a locus associated with recessively inherited, prelingual, profound sensorineural hearing impairment--to chromosome 22q13.1. We report here that mutations in a novel 218-kDa isoform of TRIOBP (TRIO and filamentous actin [F-actin] binding protein) are associated with DFNB28 hearing loss in a total of nine Palestinian families. Two nonsense mutations (R347X and Q581X) truncate the protein, and a potentially deleterious missense mutation (G1019R) occurs in a conserved motif in a putative SH3-binding domain. In seven families, 27 deaf individuals are homozygous for one of the nonsense mutations; in two other families, 3 deaf individuals are compound heterozygous for the two nonsense mutations or for Q581X and G1019R. The novel long isoform of TRIOBP has a restricted expression profile, including cochlea, retina, and fetal brain, whereas the original short isoform is widely expressed. Antibodies to TRIOBP reveal expression in sensory cells of the inner ear and colocalization with F-actin along the length of the stereocilia.

Indexed as

Genetic LinkageAmino Acid SequenceAnimalsArabsBase SequenceChromosomes, Human, Pair 22CochleaDNA PrimersGene ComponentsHearing LossHumansMiceMicrofilament ProteinsMolecular Sequence DataMutationPedigreeDNA PrimersMicrofilament ProteinsTRIOBP protein, human

Identifiers

PMID16385458
PMCPMC1380212
OpenAlexW1987491541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.