Evidence map›Paper›PMID 16381904›Full record

ArticleNucleic acids research2006

TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi.

Fernán Agüero, Wenlong Zheng, D Brent Weatherly, Pablo Mendes, Jessica C Kissinger

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. metaTIGER: a metabolic evolution resource.Nucleic acids research · 2009
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Computational biology in Argentina.PLoS computational biology · 2007
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Fernán AgüeroInstituto de Investigaciones Biotecnológicas, Universidad de San Martín San Martín, B 1650 KNA, Buenos Aires, Argentina.
Wenlong Zheng
D Brent Weatherly
Pablo Mendes
Jessica C Kissinger
National University of General San Martín · AR

Funding

VACCINE DISCOVERY FOR TRYPANOSOMA CRUZIP01AI044979 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI TARLETON, RICK L · 1999 to 2008
$7.5M
NIAID NIH HHS P01 AI044979NIAID NIH HHS P0-AI44979
6 · The paper itself

Abstract

TcruziDB (http://TcruziDB.org) is an integrated post-genomics database for the parasitic organism, Trypanosoma cruzi, the causative agent of Chagas' disease. TcruziDB was established in 2003 as a flat-file database with tools for mining the unannotated sequence reads and preliminary contig assemblies emerging from the Tri-Tryp genome consortium (TIGR/SBRI/Karolinska). Today, TcruziDB houses the recently published assembled genomic contigs and annotation provided by the genome consortium in a relational database supported by the Genomics Unified Schema (GUS) architecture. The combination of an annotated genome and a relational architecture has facilitated the integration of genomic data with expression data (proteomic and EST) and permitted the construction of automated analysis pipelines. TcruziDB has accepted, and will continue to accept the deposition of genomic and functional genomic datasets contributed by the research community.

Indexed as

Databases, GeneticGenome, ProtozoanAnimalsGene ExpressionGenomicsInternetProtozoan ProteinsSoftwareSystems IntegrationTrypanosoma cruziUser-Computer InterfaceProtozoan Proteins

Identifiers

PMID16381904
PMCPMC1347470
OpenAlexW2053235121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.