ArticleNucleic acids research2006
dictyBase, the model organism database for Dictyostelium discoideum.
Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
61 citing papers in PubMed.
- dictyBase 2026: a reimplementation of theResearch square · 2026Article
- Copine A is essential for calcium homeostasis in Dictyostelium.Cell calcium · 2025Article
- Symbiotic T6SS affects horizontal transmission ofISME communications · 2025Article
- The Multifaceted Interactions ofCells · 2024Article
- DARTpaths, an in silico platform to investigate molecular mechanisms of compounds.Bioinformatics (Oxford, England) · 2023Article
- RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine.BMC bioinformatics · 2022Article
- Under-Agarose Chemotaxis and Migration Assays for Dictyostelium.Methods in molecular biology (Clifton, N.J.) · 2022Article
- Moving the Research Forward: The Best of British Biology Using the Tractable Model SystemCells · 2021Review
- Model systems for studying polyphosphate biology: a focus on microorganisms.Current genetics · 2021Review
- Review
- Dictyostelium discoideum as a non-mammalian biomedical model.Microbial biotechnology · 2021Review
- WildEcology and evolution · 2020Article
- dictyBase and the Dicty Stock Center (version 2.0) - a progress report.The International journal of developmental biology · 2019Review
- Distinct Interaction Sites of Rac GTPase with WAVE Regulatory Complex Have Non-redundant Functions in Vivo.Current biology : CB · 2018Article
- Genetic signatures of microbial altruism and cheating in social amoebas in the wild.Proceedings of the National Academy of Sciences of the United States of America · 2018Article
- Mroh1, a lysosomal regulator localized by WASH-generated actin.Journal of cell science · 2017Article
- Improved annotation with de novo transcriptome assembly in four social amoeba species.BMC genomics · 2017Article
- Article
- dictyBase 2015: Expanding data and annotations in a new software environment.Genesis (New York, N.Y. : 2000) · 2015Article
- Classification and expression analyses of homeobox genes from Dictyostelium discoideum.Journal of biosciences · 2015Article
1 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
7 authors.
Funding
Abstract
dictyBase (http://dictybase.org) is the model organism database (MOD) for the social amoeba Dictyostelium discoideum. The unique biology and phylogenetic position of Dictyostelium offer a great opportunity to gain knowledge of processes not characterized in other organisms. The recent completion of the 34 MB genome sequence, together with the sizable scientific literature using Dictyostelium as a research organism, provided the necessary tools to create a well-annotated genome. dictyBase has leveraged software developed by the Saccharomyces Genome Database and the Generic Model Organism Database project. This has reduced the time required to develop a full-featured MOD and greatly facilitated our ability to focus on annotation and providing new functionality. We hope that manual curation of the Dictyostelium genome will facilitate the annotation of other genomes.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.