Evidence map›Paper›PMID 16380844›Full record

ArticleDevelopment genes and evolution2006

Molecular control of serial module formation along the apical-basal axis in the sponge Lubomirskia baicalensis: silicateins, mannose-binding lectin and mago nashi.

Matthias Wiens, Sergey I Belikov, Oxana V Kaluzhnaya, Anatoli Krasko, Heinz C Schröder, Sanja Perovic-Ottstadt, Werner E G Müller

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Article in Development genes and evolution, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. A pan-metazoan concept for adult stem cells: the wobbling Penrose landscape.Biological reviews of the Cambridge Philosophical Society · 2022
    Article
  4. The EJC component Magoh in non-vertebrate chordates.Development genes and evolution · 2020
    Article
  5. Lectin-Like Bacteriocins.Frontiers in microbiology · 2018
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Mannan-binding lectin of the sea urchin Strongylocentrotus nudus.Marine biotechnology (New York, N.Y.) · 2013
    Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Matthias WiensInstitut für Physiologische Chemie, Abteilung Angewandte Molekularbiologie, Universität, Duesbergweg 6, D-55099, Mainz, Germany.
Sergey I Belikov
Oxana V Kaluzhnaya
Anatoli Krasko
Heinz C Schröder
Sanja Perovic-Ottstadt
Werner E G Müller
Johannes Gutenberg University Mainz · DELimnological Institute · RUSiberian Branch of the Russian Academy of Sciences · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The freshwater sponge Lubomirskia baicalensis (from Lake Baikal) is characterized by a body plan composed of serial modules which are arranged along an apical-basal axis. In shallow water, the sponge occurs only encrusting, while in deeper environment (>3 m), this species forms branches and grows in an arborescent manner. Each module is stabilized by bundles of spined oxeas (amphioxeae spicules). The spicules are surrounded by an organic matrix. cDNAs for structural proteins (silicatein and mannose-binding lectin (MBL)) as well as for one regulatory protein (mago nashi) were isolated from L. baicalensis. Surprisingly the silicatein alpha molecule exists in several, at least four, isoforms (a1 to a4). Expression studies revealed that the steady-state levels of transcripts for the silicateins, the mannose-binding lectin, and mago nashi are highest at the top of the branches, while only very low levels are found in cells at the base. Based on in situ hybridization studies, evidence is presented that the spicule formation (1) starts and is completed inside of the bundles, and (2) occurs together with the mannose-binding lectin from the surfaces of the bundles. The data suggest that the modules are sequentially formed. It is speculated that the expression of the silicateins and the mannose-binding lectin might be (partially) controlled by mago nashi.

Indexed as

Body PatterningAmino Acid SequenceAnimalsBase SequenceCathepsinsConserved SequenceGenetic VariationIn Situ HybridizationMannose-Binding LectinModels, BiologicalMolecular Sequence DataPhylogenyPoriferaProtein IsoformsSequence Homology, Amino AcidCathepsinsMannose-Binding LectinProtein Isoformssilicatein alpha

Identifiers

PMID16380844
OpenAlexW2104329432

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.