Evidence map›Paper›PMID 16377749›Full record

ArticlePlant physiology2006

The DMI1 and DMI2 early symbiotic genes of medicago truncatula are required for a high-affinity nodulation factor-binding site associated to a particulate fraction of roots.

Bridget V Hogg, Julie V Cullimore, Raoul Ranjeva, Jean-Jacques Bono

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. TheThe Plant cell · 2020
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  5. Article
  6. Review
  7. Article
  8. Review
  9. The RPG gene of Medicago truncatula controls Rhizobium-directed polar growth during infection.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Bridget V HoggSurfaces Cellulaires et Signalisation chez les Végétaux, Unité Mixte de Recherche 5546 Centre National de la Recherche Scientifique-Université Paul Sabatier, Toulouse III, Pôle de Biotechnologie Végétale, 31326 Castanet-Tolosan, France.
Julie V Cullimore
Raoul Ranjeva
Jean-Jacques Bono
Université Toulouse III - Paul Sabatier · FRCentre National de la Recherche Scientifique · FRLaboratoire des Interactions Plantes Micro-Organismes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The establishment of the legume-rhizobia symbiosis between Medicago spp. and Sinorhizobium meliloti is dependent on the production of sulfated lipo-chitooligosaccharidic nodulation (Nod) factors by the bacterial partner. In this article, using a biochemical approach to characterize putative Nod factor receptors in the plant host, we describe a high-affinity binding site (Kd = 0.45 nm) for the major Nod factor produced by S. meliloti. This site is termed Nod factor-binding site 3 (NFBS3). NFBS3 is associated to a high-density fraction prepared from roots of Medicago truncatula and shows binding specificity for lipo-chitooligosaccharidic structures. As for the previously characterized binding sites (NFBS1 and NFBS2), NFBS3 does not recognize the sulfate group on the S. meliloti Nod factor. Studies of Nod factor binding in root extracts of early symbiotic mutants of M. truncatula reveals that the new site is present in Nod factor perception and does not make infections 3 (dmi3) mutants but is absent in dmi1 and dmi2 mutants. Roots and cell cultures of all these mutants still contain sites similar to NFBS1 and NFBS2, respectively. These results suggest that NFBS3 is different from NFBS2 and NFBS1 and is dependent on the common symbiotic genes DMI1 and DMI2 required for establishment of symbioses with both rhizobia and arbuscular mycorrhizal fungi. The potential role of this site in the establishment of root endosymbioses is discussed.

Indexed as

Binding SitesCells, CulturedGenes, PlantLipopolysaccharidesMedicago truncatulaMicrosomesMutationMycorrhizaePlant ProteinsPlant RootsSinorhizobium melilotiSymbiosislipid-linked oligosaccharidesLipopolysaccharidesPlant Proteins

Identifiers

PMID16377749
PMCPMC1326057
OpenAlexW2026490500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.