Evidence map›Paper›PMID 16365299›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Deregulation of common genes by c-Myc and its direct target, MT-MC1.

Kenneth R Rogulski, Debra E Cohen, David L Corcoran, Panayiotis V Benos, Edward V Prochownik

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  17. c-Myc-mediated genomic instability proceeds via a megakaryocytic endomitosis pathway involving Gp1balpha.Proceedings of the National Academy of Sciences of the United States of America · 2007
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  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Kenneth R RogulskiSection of Hematology/Oncology, Children's Hospital of Pittsburgh, University of Pittsburgh Graduate School of Public Health, Pittsburgh, PA 15213, USA.
Debra E Cohen
David L Corcoran
Panayiotis V Benos
Edward V Prochownik
Children's Hospital of Pittsburgh · USUniversity of Pittsburgh · USUniversity of Pittsburgh Medical Center · US

Funding

C-, N-, AND L-MYC EFFECTS ON HEMATOPOIETIC CELLSR01CA078259 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PROCHOWNIK, EDWARD VICTOR · 1999 to 2009
$2.0M
Regulation of and by the Myc OncoproteinR01CA105033 · NCI · CHILDREN'S HOSP PITTSBURGH/UPMC HLTH SYS · PI PROCHOWNIK, EDWARD VICTOR · 2004 to 2008
$1.4M
The Clinical Interface of Molecular and Cellular BiologyT32HD042987 · NICHD · CHILDREN'S HOSP PITTSBURGH/UPMC HLTH SYS · PI PERLMUTTER, DAVID H · 2002 to 2006
$1.1M
NCI NIH HHS CA078259NCI NIH HHS CA105033NCI NIH HHS R01 CA078259NCI NIH HHS R01 CA105033NICHD NIH HHS T32 HD042987NICHD NIH HHS T32HD 042987
6 · The paper itself

Abstract

In addition to its role in cancer, the c-Myc oncoprotein controls many normal cellular processes as a consequence of its function as a basic helix-loop-helix leucine zipper transcription factor. Determining which of the myriad genes under c-Myc control are relevant for these various roles is thus a major challenge. mt-mc1 is a direct c-Myc target gene whose overexpression recapitulates multiple c-Myc phenotypes, including transformation. Using transcriptional profiling, we now show that MT-MC1-overexpressing myeloid cells misregulate a total of 47 distinct transcripts, a large proportion of which are involved in signal transduction and/or cancer. Analysis of these genes reveals a consensus promoter structure consisting of multiple, often closely spaced c-Myc binding sites and three additional Wilm's tumor and Egr1-like motifs. More than one-third of MT-MC1 target genes are also clustered on six cancer-associated chromosomal loci. Most surprisingly, all of the transcripts examined also are regulated by c-Myc. Finally, an estrogen receptor-MT-MC1 fusion protein was used to establish that all examined transcripts were regulated directly by the chimeric protein. Our results thus indicate that MT-MC1 target genes largely comprise a subset of those regulated by c-Myc. We propose that the properties imparted by MT-MC1 are the result of its control of a small and select c-Myc target gene population.

Indexed as

Gene Expression RegulationGenes, mycAmino Acid MotifsAnimalsBinding SitesBlotting, WesternCarrier ProteinsCell LineChromosome MappingChromosomesGenetic VectorsHumansLeucine ZippersMiceModels, BiologicalMutationCarrier ProteinsMyct1 protein, mouseNuclear ProteinsProto-Oncogene Proteins c-mycReceptors, EstrogenRNA, Messenger

Identifiers

PMID16365299
PMCPMC1323176
OpenAlexW2086274096

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.