Evidence map›Paper›PMID 16362371›Full record

ArticleMolecular genetics and genomics : MGG2006

Kinase Cak1 functionally interacts with the PAF1 complex and phosphatase Ssu72 via kinases Ctk1 and Bur1.

Carine Ganem, Chaouki Miled, Céline Facca, Jean-Gabriel Valay, Gilles Labesse, Samia Ben Hassine, Carl Mann, Gérard Faye

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Carine GanemInstitut Curie, UMR2027 CNRS, Centre Universitaire, Orsay, France.
Chaouki Miled
Céline Facca
Jean-Gabriel Valay
Gilles Labesse
Samia Ben Hassine
Carl Mann
Gérard Faye

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein kinases orthologous with Cak1 of Saccharomyces cerevisiae (ScCak1) appear specific to ascomycetes. ScCak1 phosphorylates Cdc28, the cyclin-dependent kinase (CDK) governing the cell cycle, as well as Kin28, Bur1 and Ctk1, CDKs required for the transcription process performed by RNA polymerase II (RNA Pol II). Using genetic methods, we found that Cak1 genetically interacts with Paf1 and Ctr9, two components belonging to the PAF1 elongation complex needed for histone modifications, and with Ssu72, a protein phosphatase that dephosphorylates serine-5 phosphate in the RNA Pol II C-terminal domain. We present evidence suggesting that the interactions linking Cak1 with the PAF1 complex and with Ssu72 are not direct but mediated via Ctk1 and Bur1. We discuss the possibility that Ssu72 intervenes at the capping checkpoint step of the transcription cycle.

Indexed as

Base SequenceCarrier ProteinsCell Cycle ProteinsCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesDNA, ComplementaryDNA, FungalGenes, FungalGenes, LethalmRNA Cleavage and Polyadenylation FactorsMutationNuclear ProteinsPhosphoprotein PhosphatasesPlasmidsProtein KinasesSaccharomyces cerevisiaeCarrier ProteinsCell Cycle ProteinsCTDK-I protein complex, S cerevisiaeCTR9 protein, S cerevisiaeCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesDNA, ComplementaryDNA, FungalmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsPAF1 protein, S cerevisiaePhosphoprotein PhosphatasesProtein KinasesSaccharomyces cerevisiae ProteinsSGV1 protein, S cerevisiaeSSU72 protein, S cerevisiaeTranscriptional Elongation Factors

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.