Evidence map›Paper›PMID 16362044›Full record

ArticleThe EMBO journal2006

Adi3 is a Pdk1-interacting AGC kinase that negatively regulates plant cell death.

Timothy P Devarenne, Sophia K Ekengren, Kerry F Pedley, Gregory B Martin

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  6. Article
  7. Article
  8. Cargo Recognition and Function of Selective Autophagy Receptors in Plants.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. The Journal of biological chemistry · 2017
    Article
  16. Article
  17. Perturbation of Auxin Homeostasis and Signaling byFrontiers in plant science · 2017
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Timothy P DevarenneBoyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853-1801, USA.
Sophia K Ekengren
Kerry F Pedley
Gregory B Martin
Ithaca College · USCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial speck disease in tomato is caused by Pseudomonas syringae pv. tomato. Resistance to this disease is conferred by the host Pto kinase, which recognizes P. s. pv. tomato strains that express the effector AvrPto. We report here that an AvrPto-dependent Pto-interacting protein 3 (Adi3) is a member of the AGC family of protein kinases. In mammals, AGC kinases are regulated by 3-phosphoinositide-dependent protein kinase-1 (Pdk1). We characterized tomato Pdk1 and showed that Pdk1 and Pto phosphorylate Adi3. Gene silencing of Adi3 in tomato causes MAPKKKalpha-dependent formation of necrotic lesions. Use of a chemical inhibitor of Pdk1, OSU-03012, also implicates Pdk1 and Adi3 in plant cell death regulation. Adi3 thus appears to function analogously to the mammalian AGC kinase protein kinase B/Akt by negatively regulating cell death via Pdk1 phosphorylation. We speculate that the negative regulatory function of Adi3 might be subverted by interaction with Pto/AvrPto, leading to host cell death that is associated with pathogen attack.

Indexed as

3-Phosphoinositide-Dependent Protein KinasesAmino Acid SequenceApoptosisBacterial ProteinsCloning, MolecularGene SilencingGenes, PlantMAP Kinase Kinase KinasesMolecular Sequence DataMutationPhosphorylationPlant DiseasesPlant ProteinsProtein Serine-Threonine KinasesPseudomonas syringaeSolanum lycopersicum3-Phosphoinositide-Dependent Protein KinasesavrPto protein, Pseudomonas syringaeBacterial ProteinsMAP Kinase Kinase KinasesPlant ProteinsProtein Serine-Threonine KinasesPto protein, Lycopersicon

Identifiers

PMID16362044
PMCPMC1356353
OpenAlexW2062057270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.