Evidence map›Paper›PMID 16359560›Full record

ArticlePlant methods2005

A procedure for localisation and electrophysiological characterisation of ion channels heterologously expressed in a plant context.

E Hosy, G Duby, A-A Véry, A Costa, H Sentenac, J-B Thibaud

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

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  11. Review. CLC-mediated anion transport in plant cells.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 4 countries.

E Hosy *Biochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
G Duby *Biochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
A-A VéryBiochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
A CostaBiochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
H SentenacBiochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
J-B ThibaudBiochimie et Physiologie Moléculaires des Plantes, UMR 5004, Agro-M/CNRS/INRA/UM2, F-34060 Montpellier Cedex 1, France.
Centre National de la Recherche Scientifique · FRDefence Research and Development Canada · CAInstitut des Sciences des Plantes de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn silico analyses based on sequence similarities with animal channels have identified a large number of plant genes likely to encode ion channels. The attempts made to characterise such putative plant channels at the functional level have most often relied on electrophysiological analyses in classical expression systems, such as Xenopus oocytes or mammalian cells. In a number of cases, these expression systems have failed so far to provide functional data and one can speculate that using a plant expression system instead of an animal one might provide a more efficient way towards functional characterisation of plant channels, and a more realistic context to investigate regulation of plant channels.

resultsWith the aim of developing a plant expression system readily amenable to electrophysiological analyses, we optimised experimental conditions for preparation and transformation of tobacco mesophyll protoplasts and engineered expression plasmids, that were designed to allow subcellular localisation and functional characterisation of ion channels eventually in presence of their putative (possibly over-expressed) regulatory partners. Two inward K+ channels from the Shaker family were functionally expressed in this system: not only the compliant KAT1 but also the recalcitrant AKT1 channel, which remains electrically silent when expressed in Xenopus oocytes or in mammalian cells.

conclusionThe level of endogenous currents in control protoplasts seems compatible with the use of the described experimental procedures for the characterisation of plant ion channels, by studying for instance their subcellular localisation, functional properties, structure-function relationships, interacting partners and regulation, very likely in a more realistic context than the classically used animal systems.

Identifiers

PMID16359560
PMCPMC1352354
OpenAlexW2106732090

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.