ArticleGenome biology2005
Ulysses - an application for the projection of molecular interactions across species.
Article in Genome biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
14 citing papers in PubMed.
- Identification of functional modules by integration of multiple data sources using a Bayesian network classifier.Circulation. Cardiovascular genetics · 2014Article
- Comparative analysis of virus-host interactomes with a mammalian high-throughput protein complementation assay based on Gaussia princeps luciferase.Methods (San Diego, Calif.) · 2012Article
- IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins.Nucleic acids research · 2012Article
- Article
- Bio::Homology::InterologWalk--a Perl module to build putative protein-protein interaction networks through interolog mapping.BMC bioinformatics · 2011Article
- Signalogs: orthology-based identification of novel signaling pathway components in three metazoans.PloS one · 2011Article
- POINeT: protein interactome with sub-network analysis and hub prioritization.BMC bioinformatics · 2009Article
- Ortholog-based protein-protein interaction prediction and its application to inter-species interactions.BMC bioinformatics · 2008Article
- Interspecies data mining to predict novel ING-protein interactions in human.BMC genomics · 2008Article
- Prediction of protein-protein interactions on the basis of evolutionary conservation of protein functions.Evolutionary bioinformatics online · 2007Article
- Probabilistic prediction and ranking of human protein-protein interactions.BMC bioinformatics · 2007Article
- An evaluation of human protein-protein interaction data in the public domain.BMC bioinformatics · 2006Article
- Protein-protein interactions more conserved within species than across species.PLoS computational biology · 2006Article
- NovelFam3000--uncharacterized human protein domains conserved across model organisms.BMC genomics · 2006Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors.
Funding
Abstract
We developed Ulysses as a user-oriented system that uses a process called Interolog Analysis for the parallel analysis and display of protein interactions detected in various species. Ulysses was designed to perform such Interolog Analysis by the projection of model organism interaction data onto homologous human proteins, and thus serves as an accelerator for the analysis of uncharacterized human proteins. The relevance of projections was assessed and validated against published reference collections. All source code is freely available, and the Ulysses system can be accessed via a web interface http://www.cisreg.ca/ulysses.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.