ArticleProceedings of the National Academy of Sciences of the United States of America2005
A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
64 citing papers in PubMed.
- Dissecting the Strain and Sex Specific Connectome Signatures of Unanesthetized C57BL/6J and DBA/2J Mice Using Magnetic Resonance Imaging.Genes, brain, and behavior · 2026Article
- Technologies to Study Genetics and Molecular Pathways.Advances in experimental medicine and biology · 2024Review
- Towards reliable reconstruction of the mouse brain corticothalamic connectivity using diffusion MRI.NeuroImage · 2023Article
- Transcriptional atlas analysis from multiple tissues reveals the expression specificity patterns in beef cattle.BMC biology · 2022Article
- Role of Claudins in Renal Branching Morphogenesis.Physiological reports · 2020Article
- A high resolution atlas of gene expression in the domestic sheep (Ovis aries).PLoS genetics · 2017Article
- The old and new face of craniofacial research: How animal models inform human craniofacial genetic and clinical data.Developmental biology · 2016Review
- De Novo and Rare Variants at Multiple Loci Support the Oligogenic Origins of Atrioventricular Septal Heart Defects.PLoS genetics · 2016Article
- Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development.BMC genomics · 2015Article
- The predictive power of brain mRNA mappings for in vivo protein density: a positron emission tomography correlation study.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2014Article
- Claudin-7, -16, and -19 during mouse kidney development.Tissue barriers · 2014Article
- MitProNet: A knowledgebase and analysis platform of proteome, interactome and diseases for mammalian mitochondria.PloS one · 2014Article
- Mouse IDGenes: a reference database for genetic interactions in the developing mouse brain.Database : the journal of biological databases and curation · 2014Article
- Integrative proteomic and transcriptomic analyses reveal multiple post-transcriptional regulatory mechanisms of mouse spermatogenesis.Molecular & cellular proteomics : MCP · 2013Article
- Identification and analysis of murine pancreatic islet enhancers.Diabetologia · 2013Article
- Rare copy number variants contribute to congenital left-sided heart disease.PLoS genetics · 2012Article
- Tissue-specific alternative polyadenylation at the imprinted gene Mest regulates allelic usage at Copg2.Nucleic acids research · 2012Article
- Tissue-specific functional networks for prioritizing phenotype and disease genes.PLoS computational biology · 2012Article
- "Guilt by association" is the exception rather than the rule in gene networks.PLoS computational biology · 2012Article
- piRNA profiling during specific stages of mouse spermatogenesis.RNA (New York, N.Y.) · 2011Article
4 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
50 authors.
Funding
Abstract
We analyzed 8.55 million LongSAGE tags generated from 72 libraries. Each LongSAGE library was prepared from a different mouse tissue. Analysis of the data revealed extensive overlap with existing gene data sets and evidence for the existence of approximately 24,000 previously undescribed genomic loci. The visual cortex, pancreas, mammary gland, preimplantation embryo, and placenta contain the largest number of differentially expressed transcripts, 25% of which are previously undescribed loci.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.