Evidence map›Paper›PMID 16341836›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2006

Quantitative trait loci controlling sulfur containing amino acids, methionine and cysteine, in soybean seeds.

D R Panthee, V R Pantalone, C E Sams, A M Saxton, D R West, J H Orf, A S Killam

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 105 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Soybean genetic resources contributing to sustainable protein production.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  12. Article
  13. Article
  14. Genetic analysis of sucrose concentration in soybean seeds using a historical soybean genomic panel.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  15. Article
  16. Article
  17. Fine mapping QTL and mining genes for protein content in soybean by the combination of linkage and association analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

D R PantheeDepartment of Plant Sciences, University of Tennessee, 2431 Joe Johnson Dr, 252 Ellington Plant Sciences Bldg, Knoxville, TN 37996, USA.
V R Pantalone
C E Sams
A M Saxton
D R West
J H Orf
A S Killam
University of Tennessee at Knoxville · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean [Glycine max (L.) Merr.] is the single largest source of protein in animal feed. However, a major limitation of soy proteins is their deficiency in sulfur-containing amino acids, methionine (Met) and cysteine (Cys). The objective of this study was to identify quantitative trait loci (QTL) associated with Met and Cys concentration in soybean seed. To achieve this objective, 101 F(6)-derived recombinant inbred lines (RIL) from a population developed from a cross of N87-984-16 x TN93-99 were used. Ground soybean seed samples were analyzed for Met and Cys concentration using a near infrared spectroscopy instrument. Data were analyzed using SAS software and QTL Cartographer. RIL differed (P<0.01) in Met and Cys concentrations, with a range of 5.1-7.3 (g kg(-1) seed dry weight) for Cys and 4.4-8.8 (g kg(-1) seed dry weight) for Met. Heritability estimates on an entry mean basis were 0.14 and 0.57 for Cys and Met, respectively. A total of 94 polymorphic simple sequence repeat molecular genetic markers were screened in the RIL. Single factor ANOVA was used to identify candidate QTL, which were confirmed by composite interval mapping using QTL Cartographer. Four QTL linked to molecular markers Satt235, Satt252, Satt427 and Satt436 distributed on three molecular linkage groups (MLG) D1a, F and G were associated with Cys and three QTL linked to molecular markers Satt252, Satt564 and Satt590 distributed on MLG F, G and M were associated with Met concentration in soybean seed. QTL associated with Met and Cys in soybean seed will provide important information to breeders targeting improvements in the nutritional quality of soybean.

Indexed as

Quantitative Trait LociAmino AcidsAnalysis of VarianceChromosome MappingChromosomes, PlantCrosses, GeneticCysteineDNA, PlantGenetic LinkageGenetic MarkersGenetic VariationGlycine maxLod ScoreMethionineMicrosatellite RepeatsPolymorphism, GeneticAmino AcidsCysteineDNA, PlantGenetic MarkersMethionine

Identifiers

PMID16341836
OpenAlexW2014994682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.