Evidence map›Paper›PMID 16341055›Full record

ArticleGenes and immunity2006

Examination of seven candidate regions for multiple sclerosis: strong evidence of linkage to chromosome 1q44.

S J Kenealy, L A Herrel, Y Bradford, N Schnetz-Boutaud, J R Oksenberg, S L Hauser, L F Barcellos, S Schmidt, S G Gregory, M A Pericak-Vance and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

S J KenealyCenter for Human Genetics Research, Vanderbilt University Medical Center, Nashville, TN 37232-0700, USA.
L A Herrel
Y Bradford
N Schnetz-Boutaud
J R Oksenberg
S L Hauser
L F Barcellos
S Schmidt
S G Gregory
M A Pericak-Vance
J L Haines
Center for Human Genetics · USVanderbilt University Medical Center · USUniversity of California, San Francisco · USBerkeley Public Health Division · USDuke University · USDuke University Hospital · US

Funding

GENE LINKAGE STUDY OF MULTIPLE SCLEROSIS SIBLING PAIRSR01NS026799 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HAUSER, STEPHEN L, OKSENBERG, JORGE R. · 1989 to 2018
$6.8M
SENSORY FEEDBACK SIGNAL DERIVATION FROM AFFERENT NEURONSN01NS032380 · NINDS · SIMON FRASER UNIVERSITY · PI HOFFER, ANDY J · 1993 to 1996
–
NINDS NIH HHS NS26799NINDS NIH HHS NS32380
6 · The paper itself

Abstract

Multiple sclerosis (MS) is a debilitating neuroimmunological and neurodegenerative disease with a strong genetic component. Numerous studies have failed to consistently identify genes that confer disease susceptibility except for association with HLA-DR. Seven non-HLA regions (1q, 2q, 9q, 13q, 16q, 18p and 19q) identified in a recent genomic screen were investigated by genotyping approximately 20 single-nucleotide polymorphisms (SNPs) at approximately 1 Mb intervals. Non-parametric multipoint analyses identified a peak LOD* score of 2.99 for the 1q44 region and substantially narrowed the linkage peak to approximately 7 Mb. Ordered subset analyses (OSA) identified significant LOD score increases for 2q35 and 18p11 when ranking families by HLA-DR status and identified a significant LOD score increase in region 2q35 when ranking families by linkage to chromosome 1q44. 1q44 is particularly interesting because of linkage evidence for this region in studies of both rheumatoid arthritis and systemic lupus erythematosus.

Indexed as

Chromosomes, Human, Pair 1Genetic LinkageGenetic Predisposition to DiseaseChromosomes, Human, Pair 18Chromosomes, Human, Pair 2HLA-DR2 AntigenHumansLod ScoreMultiple SclerosisPolymorphism, Single NucleotideHLA-DR2 Antigen

Identifiers

PMID16341055
OpenAlexW2082049821

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.