Evidence map›Paper›PMID 16339310›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

RHL1 is an essential component of the plant DNA topoisomerase VI complex and is required for ploidy-dependent cell growth.

Keiko Sugimoto-Shirasu, Gethin R Roberts, Nicola J Stacey, Maureen C McCann, Anthony Maxwell, Keith Roberts

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 123 citations in OpenAlex.

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  13. Topoisomerase VI participates in an insulator-like function that prevents H3K9me2 spreading.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Article
  15. DNA topoisomerases: Advances in understanding of cellular roles and multi-protein complexes via structure-function analysis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2021
    Review
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  20. Ploidy-dependent changes in the epigenome of symbiotic cells correlate with specific patterns of gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Keiko Sugimoto-ShirasuDepartment of Cell and Developmental Biology, John Innes Centre, Colney, Norwich NR4 7UH, United Kingdom. keiko.sugimoto@bbsrc.ac.uk
Gethin R Roberts
Nicola J Stacey
Maureen C McCann
Anthony Maxwell
Keith Roberts
John Innes Centre · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/00000201Biotechnology and Biological Sciences Research Council G18653
6 · The paper itself

Abstract

How cells achieve their final sizes is a pervasive biological question. One strategy to increase cell size is for the cell to amplify its chromosomal DNA content through endoreduplication cycles. Although endoreduplication is widespread in eukaryotes, we know very little about its molecular mechanisms. Successful progression of the endoreduplication cycle in Arabidopsis requires a plant homologue of archaeal DNA topoisomerase (topo) VI. To further understand how DNA is endoreduplicated and how this process is regulated, we isolated a dwarf Arabidopsis mutant, hyp7 (hypocotyl 7), in which various large cell types that in the wild type normally endoreduplicate multiple times complete only the first two rounds of endoreduplication and stall at 8C. HYP7 encodes the RHL1 (ROOT HAIRLESS 1) protein, and sequence analysis reveals that RHL1 has similarity to the C-terminal domain of mammalian DNA topo IIalpha, another type II topo that shares little sequence homology with topo VI. RHL1 shows DNA binding activity in vitro, and we present both genetic and in vivo evidence that RHL1 forms a multiprotein complex with plant topo VI. We propose that RHL1 plays an essential role in the topo VI complex to modulate its function and that the two distantly related topos, topo II and topo VI, have evolved a common domain that extends their function. Our data suggest that plant topo II and topo VI play distinct but overlapping roles during the mitotic cell cycle and endoreduplication cycle.

Indexed as

PloidiesAmino Acid SequenceArabidopsisArabidopsis ProteinsArchaeal ProteinsBase SequenceCell CycleCell SizeCloning, MolecularDNADNA-Binding ProteinsDNA TopoisomerasesDNA Topoisomerases, Type IIMeiotic Recombination Protein SPO11Molecular Sequence DataNuclear ProteinsArabidopsis ProteinsArchaeal ProteinsDNADNA-Binding ProteinsDNA TopoisomerasesDNA Topoisomerases, Type IIDNA topoisomerase VIMeiotic Recombination Protein SPO11Nuclear ProteinsRHL1 protein, ArabidopsisSPO11-3 protein, Arabidopsis

Identifiers

PMID16339310
PMCPMC1309048
OpenAlexW2148621552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.