Evidence map›Paper›PMID 16333572›Full record

ArticleProtoplasma2005

In planta analysis of protein-protein interactions related to light signaling by bimolecular fluorescence complementation.

T Stolpe, C Süsslin, K Marrocco, P Nick, T Kretsch, S Kircher

Abstract read
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In one paragraph

Article in Protoplasma, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. PoplarInternational journal of molecular sciences · 2020
    Article
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  13. MSI4/FVE interacts with CUL4-DDB1 and a PRC2-like complex to control epigenetic regulation of flowering time in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  14. Article
  15. Article
  16. Negative feedback regulation of UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

T StolpeBotanik, Institut für Biologie 2, Universität Freiburg, 79104 Freiburg, FR Germany.
C Süsslin
K Marrocco
P Nick
T Kretsch
S Kircher

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The determination of protein-protein interactions is becoming more and more important in the molecular analysis of signal transduction chains. To this purpose the application of a manageable and simple assay in an appropriate biological system is of major concern. Bimolecular fluorescence complementation (BiFC) is a novel method to analyze protein-protein interactions in vivo. The assay is based on the observation that N- and C-terminal subfragments of the yellow-fluorescent protein (YFP) can only reconstitute a functional fluorophore when they are brought into tight contact. Thus, proteins can be fused to the YFP subfragments and the interaction of the fusion proteins can be monitored by epifluorescence microscopy. Pairs of interacting proteins were tested after transient cotransfection in etiolated mustard seedlings, which is a well characterized plant model system for light signal transduction. BiFC could be demonstrated with the F-box protein EID1 (empfindlicher im dunkelroten Licht 1) and the Arabidopsis S-phase kinase-related protein 1 (ASK1). The interaction of both proteins was specific and strictly dependent on the presence of an intact F-box domain. Our studies also demonstrate that etiolated mustard seedlings provide a versatile transient assay system to study light-induced subcellular localization events.

Indexed as

LightBase SequenceDNA-Binding ProteinsF-Box ProteinsLuminescent ProteinsMolecular Sequence DataMustard PlantPetroselinumPhytochrome APlant ProteinsPlantsPlants, Genetically ModifiedPlasmidsProtoplastsRecombinant Fusion ProteinsSeedlingsCPRF protein, Petroselinum crispumDNA-Binding ProteinsF-Box ProteinsLuminescent ProteinsPhytochrome APlant ProteinsRecombinant Fusion Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.