Evidence map›Paper›PMID 16333124›Full record

ArticleJournal of clinical microbiology2005

Molecular identification of adenoviruses in clinical samples by analyzing a partial hexon genomic region.

I Casas, A Avellon, M Mosquera, O Jabado, J E Echevarria, R H Campos, M Rewers, P Perez-Breña, W I Lipkin, G Palacios

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
  2. The value of primary care networks for molecular surveillance of paediatric respiratory infections.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  3. Article
  4. Article
  5. Article
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  7. Article
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  9. Review
  10. Article
  11. Article
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  13. Article
  14. Article
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  16. Article
  17. Article
  18. First report of severe acute otitis media caused by Campylobacter rectus and review of the literature.Journal of infection and chemotherapy : official journal of the Japan Society of Chemotherapy · 2016
    Article
  19. Article
  20. human adenoviruses role in ophthalmic pterygium formation.Jundishapur journal of microbiology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

I CasasJerome L. and Dawn Greene Infectious Disease Laboratory, Mailman School of Public Health, Columbia University, 772 W. 168th Street, Floor 18, New York, NY 10032, USA.
A Avellon
M Mosquera
O Jabado
J E Echevarria
R H Campos
M Rewers
P Perez-Breña
W I Lipkin
G Palacios

Funding

Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LIPKIN, W. IAN · 2003 to 2014
$100.8M
A Staged Strategy for Virus Identification and DiscoveryR01AI051292 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIPKIN, W. IAN · 2002 to 2005
$2.0M
Viral Triggers of Type 1 DiabetesR21AI055466 · NIAID · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J. · 2002 to 2003
$607k
A Staged Strategy for Virus Identification and DiscoveryR21AI056118 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIPKIN, W. IAN · 2003 to 2004
$491k
NIAID NIH HHS R01 AI051292NIAID NIH HHS R21 AI055466NIAID NIH HHS R21 AI056118NIAID NIH HHS U54 AI057158
6 · The paper itself

Abstract

Here we present a system for adenovirus detection and genotyping based on PCR amplification and phylogenetic analysis of a conserved hexon gene fragment. The system was validated using 157 sequences (86 previously typed and 71 clinical samples) and correctly identified species and serotype in 100% and 84% of sequences, respectively. Known associations between specific serotypes and clinical syndromes are verified. Possible new associations are described to allow further independent testing.

Indexed as

Sequence Analysis, DNAAdenoviruses, HumanAdenovirus Infections, HumanAdolescentAdultCapsid ProteinsChildChild, PreschoolDNA, ViralGenome, ViralHumansInfantInfant, NewbornMiddle AgedMolecular Sequence DataPhylogenyCapsid ProteinsDNA, Viralhexon capsid protein, Adenovirus

Identifiers

PMID16333124
PMCPMC1317187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.