Evidence map›Paper›PMID 16332962›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Down-regulation of the retinoblastoma tumor suppressor by the hepatitis C virus NS5B RNA-dependent RNA polymerase.

Tsubasa Munakata, Mitsuyasu Nakamura, Yuqiong Liang, Kui Li, Stanley M Lemon

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Pooled it
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  12. HCV and tumor-initiating stem-like cells.Frontiers in physiology · 2022
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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tsubasa MunakataDepartment of Microbiology and Immunology, Institute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, 77555-1019, USA.
Mitsuyasu Nakamura
Yuqiong Liang
Kui Li
Stanley M Lemon
The University of Texas Medical Branch at Galveston · US

Funding

Virus-Host Interactions in Hepatitis C Virus (HCV) InfectionsU19AI040035 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI GALE, MICHAEL · 1996 to 2009
$12.0M
Impact of HCV NS3/4A Protease on Host Innate ImmunityR21DA018054 · NIDA · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI LI, KUI · 2003 to 2004
$302k
NIAID NIH HHS U19 AI040035NIAID NIH HHS U19-AI40035NIDA NIH HHS R21 DA018054NIDA NIH HHS R21-DA018054
6 · The paper itself

Abstract

The retinoblastoma tumor-suppressor protein (Rb) plays a critical role in controlling cellular proliferation and apoptosis by regulating E2F transcription factors. Rb is a key target of oncoproteins expressed by DNA tumor viruses, but RNA viruses are not known to regulate Rb function. Here, we show that Rb abundance is negatively regulated in cells containing replicating genomic RNA from hepatitis C virus, a human virus strongly associated with hepatocellular carcinoma. The viral RNA-dependent RNA polymerase NS5B forms a complex with Rb, targeting it for degradation and resulting in reduction of Rb abundance, activation of E2F-responsive promoters, and cell proliferation. NS5B contains a conserved Leu-x-Cys/Asn-x-Asp motif that is homologous to Rb-binding domains in the oncoproteins of DNA viruses. This domain overlaps the polymerase active site, and mutations within it abrogate Rb binding and reverse the effects of NS5B on E2F promoter activation and cell proliferation. These findings suggest a unique link between an oncogenic RNA virus implicated in the development of liver cancer and a critically important tumor-suppressor protein.

Indexed as

Amino Acid MotifsAmino Acid SequenceCell LineDown-RegulationE2F Transcription FactorsHepacivirusHumansImmunoblottingImmunoprecipitationLuciferasesMolecular Sequence DataMutationPromoter Regions, GeneticRetinoblastoma ProteinRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsE2F Transcription FactorsLuciferasesNS-5 protein, hepatitis C virusRetinoblastoma ProteinRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID16332962
PMCPMC1307512
OpenAlexW2146239918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.