Evidence map›Paper›PMID 16332694›Full record

ArticleNucleic acids research2005

SNEV is an evolutionarily conserved splicing factor whose oligomerization is necessary for spliceosome assembly.

Johannes Grillari, Paul Ajuh, Guido Stadler, Marlies Löscher, Regina Voglauer, Wolfgang Ernst, Janet Chusainow, Frank Eisenhaber, Marion Pokar, Klaus Fortschegger and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. SNEVStem cell reports · 2017
    Article
  7. Review
  8. Ubiquitous overexpression of the DNA repair factorNPJ aging and mechanisms of disease · 2017
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Molecular architecture of the human Prp19/CDC5L complex.Molecular and cellular biology · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Johannes GrillariInstitute of Applied Microbiology, University of Natural Resources and Applied Life Sciences Vienna, Austria Muthgasse 18, A-1190 Vienna. j.grillari@iam.boku.ac.at
Paul Ajuh
Guido Stadler
Marlies Löscher
Regina Voglauer
Wolfgang Ernst
Janet Chusainow
Frank Eisenhaber
Marion Pokar
Klaus Fortschegger
Martin Grey
Angus I Lamond
Hermann Katinger
BOKU University · AT

Funding

Wellcome Trust 073980
6 · The paper itself

Abstract

We have isolated the human protein SNEV as downregulated in replicatively senescent cells. Sequence homology to the yeast splicing factor Prp19 suggested that SNEV might be the orthologue of Prp19 and therefore might also be involved in pre-mRNA splicing. We have used various approaches including gene complementation studies in yeast using a temperature sensitive mutant with a pleiotropic phenotype and SNEV immunodepletion from human HeLa nuclear extracts to determine its function. A human-yeast chimera was indeed capable of restoring the wild-type phenotype of the yeast mutant strain. In addition, immunodepletion of SNEV from human nuclear extracts resulted in a decrease of in vitro pre-mRNA splicing efficiency. Furthermore, as part of our analysis of protein-protein interactions within the CDC5L complex, we found that SNEV interacts with itself. The self-interaction domain was mapped to amino acids 56-74 in the protein's sequence and synthetic peptides derived from this region inhibit in vitro splicing by surprisingly interfering with spliceosome formation and stability. These results indicate that SNEV is the human orthologue of yeast PRP19, functions in splicing and that homo-oligomerization of SNEV in HeLa nuclear extract is essential for spliceosome assembly and that it might also be important for spliceosome stability.

Indexed as

RNA SplicingAmino Acid SequenceCell NucleusConserved SequenceDNA Repair EnzymesEvolution, MolecularHeLa CellsHumansMolecular Sequence DataMutationNuclear ProteinsPeptidesPhenotypeProtein Structure, TertiaryRecombinant ProteinsRNA-Binding ProteinsDNA Repair EnzymesNuclear ProteinsPeptidesPRP19 protein, S cerevisiaePRPF19 protein, humanRecombinant ProteinsRNA-Binding ProteinsRNA, MessengerRNA PrecursorsRNA Splicing FactorsSaccharomyces cerevisiae ProteinsUbiquitin-Protein Ligases

Identifiers

PMID16332694
PMCPMC1310963
OpenAlexW2148864927

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.