Evidence map›Paper›PMID 16330756›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Occupancy of the Drosophila hsp70 promoter by a subset of basal transcription factors diminishes upon transcriptional activation.

Lyubov A Lebedeva, Elena N Nabirochkina, Mariya M Kurshakova, Flavie Robert, Aleksey N Krasnov, Mihail B Evgen'ev, James T Kadonaga, Sofia G Georgieva, Làszlò Tora

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 64 citations in OpenAlex.

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  2. International journal of molecular sciences · 2023
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  19. Drosophila Inducer of MEiosis 4 (IME4) is required for Notch signaling during oogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Lyubov A LebedevaInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Centre National de Recherche Scientifique, Unité Mixte de Recherche 7104, Université Louis Pasteur de Strasbourg, BP 10142, Illkirch, France.
Elena N Nabirochkina
Mariya M Kurshakova
Flavie Robert
Aleksey N Krasnov
Mihail B Evgen'ev
James T Kadonaga
Sofia G Georgieva
Làszlò Tora
Institut de Biologie Moléculaire et Cellulaire · FR

Funding

MECHANISMS OF TRANSCRIPTIONAL REGULATION IN EUKARYOTESR01GM041249 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KADONAGA, JAMES T. · 1989 to 2016
$5.4M
NIGMS NIH HHS GM41249NIGMS NIH HHS R01 GM041249
6 · The paper itself

Abstract

The presence of general transcription factors and other coactivators at the Drosophila hsp70 gene promoter in vivo has been examined by polytene chromosome immunofluorescence and chromatin immunoprecipitation at endogenous heat-shock loci or at a hsp70 promoter-containing transgene. These studies indicate that the hsp70 promoter is already occupied by TATA-binding protein (TBP) and several TBP-associated factors (TAFs), TFIIB, TFIIF (RAP30), TFIIH (XPB), TBP-free/TAF-containg complex (GCN5 and TRRAP), and the Mediator complex subunit 13 before heat shock. After heat shock, there is a significant recruitment of the heat-shock transcription factor, RNA polymerase II, XPD, GCN5, TRRAP, or Mediator complex 13 to the hsp70 promoter. Surprisingly, upon heat shock, there is a marked diminution in the occupancy of TBP, six different TAFs, TFIIB, and TFIIF, whereas there is no change in the occupancy of these factors at ecdysone-induced loci under the same conditions. Hence, these findings reveal a distinct mechanism of transcriptional induction at the hsp70 promoters, and further indicate that the apparent promoter occupancy of the general transcriptional factors does not necessarily reflect the transcriptional state of a gene.

Indexed as

AnimalsChromatin ImmunoprecipitationDNA PrimersDrosophilaFluorescent Antibody Technique, IndirectHSP70 Heat-Shock ProteinsPolymerase Chain ReactionPromoter Regions, GeneticTranscriptional ActivationTranscription FactorsDNA PrimersHSP70 Heat-Shock ProteinsTranscription Factors

Identifiers

PMID16330756
PMCPMC1306797
OpenAlexW1991298006

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.