Evidence map›Paper›PMID 16328372›Full record

ArticleMolecular genetics and genomics : MGG2006

Role of the iron mobilization and oxidative stress regulons in the genomic response of yeast to hydroxyurea.

Caroline Dubacq, Anne Chevalier, Régis Courbeyrette, Cyrille Petat, Xavier Gidrol, Carl Mann

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In one paragraph

Article in Molecular genetics and genomics : MGG, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

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  7. Effects of sirtuins on the riboflavin production in Ashbya gossypii.Applied microbiology and biotechnology · 2021
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  20. The yeast copper response is regulated by DNA damage.Molecular and cellular biology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Caroline DubacqService de Biochimie et de Génétique Moléculaire, CEA/Saclay, Gif-sur-Yvette, France.
Anne Chevalier
Régis Courbeyrette
Cyrille Petat
Xavier Gidrol
Carl Mann
CEA Paris-Saclay · FRGenopole (France) · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniformed Services University of the Health Sciences · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydroxyurea (HU) is a specific inhibitor of ribonucleotide reductase and thus impairs dNTP synthesis and DNA replication. The long-term transcriptional response of yeast cells to hydroxyurea was investigated using DNA microarrays containing all yeast coding sequences. We show that the redox-responsive Yap regulon and the iron-mobilization Aft regulon are activated in yeast cells treated with HU. Yap1 accumulates in the nucleus in response to HU, but HU activation of the Yap regulon was only partially dependent on Yap1 and yap1Delta mutants were not hypersensitive to HU. In contrast, deletion of the AFT1 and AFT2 transcription factor genes blocked the HU activation of a subset of the Aft regulon and the aft1Delta aft2Delta double mutant was hypersensitive to HU in an iron-suppressible manner. These results highlight the importance of the redox and iron mobilization regulons in the cellular response to HU.

Indexed as

RegulonDrug Resistance, FungalEnzyme InhibitorsGene Expression ProfilingGenome, FungalHydroxyureaIronOligonucleotide Array Sequence AnalysisOxidative StressProtein Serine-Threonine KinasesRibonucleotide ReductasesSaccharomyces cerevisiaeEnzyme InhibitorsHydroxyureaIronProtein Serine-Threonine KinasesRibonucleotide ReductasesSNF1-related protein kinases

Identifiers

PMID16328372
OpenAlexW2006347677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.