ArticleThe Plant cell2006
Ordered histone modifications are associated with transcriptional poising and activation of the phaseolin promoter.
Article in The Plant cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.
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Who cites it
40 citing papers in PubMed.
- Ethylene induces combinatorial effects of histone H3 acetylation in gene expression in Arabidopsis.BMC genomics · 2017Article
- Regulatory cis-elements are located in accessible promoter regions of the CAT2 promoter and affect activating histone modifications in Arabidopsis thaliana.Plant molecular biology · 2017Article
- Genomic Analysis of Storage Protein Deficiency in Genetically Related Lines of Common Bean (Phaseolus vulgaris).Frontiers in plant science · 2016Article
- SCARECROW-LIKE15 interacts with HISTONE DEACETYLASE19 and is essential for repressing the seed maturation programme.Nature communications · 2015Article
- The Phaseolus vulgaris PvTRX1h gene regulates plant hormone biosynthesis in embryogenic callus from common bean.Frontiers in plant science · 2015Article
- SEEDSTICK is a master regulator of development and metabolism in the Arabidopsis seed coat.PLoS genetics · 2014Article
- Role of chromatin in water stress responses in plants.Journal of experimental botany · 2014Review
- Histone acetyltransferases in plant development and plasticity.Current genomics · 2014Article
- Gene networks and chromatin and transcriptional regulation of the phaseolin promoter in Arabidopsis.The Plant cell · 2013Article
- A novel abi5 allele reveals the importance of the conserved Ala in the C3 domain for regulation of downstream genes and salt tolerance during germination in Arabidopsis.Plant signaling & behavior · 2013Article
- Article
- Abscisic Acid synthesis and response.The arabidopsis book · 2013Article
- HISTONE DEACETYLASE19 interacts with HSL1 and participates in the repression of seed maturation genes in Arabidopsis seedlings.The Plant cell · 2013Article
- Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon.Nucleic acids research · 2012Article
- Detection of histone modifications in plant leaves.Journal of visualized experiments : JoVE · 2011Article
- Functional analysis of the DAT gene promoter using transient Catharanthus roseus and stable Nicotiana tabacum transformation systems.Plant cell reports · 2011Article
- cis- and trans-Regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids.The Plant cell · 2011Article
- Chromatin modification acts as a memory for systemic acquired resistance in the plant stress response.EMBO reports · 2011Article
- Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana.BMC plant biology · 2010Article
- Chromatin landscape dictates HSF binding to target DNA elements.PLoS genetics · 2010Article
Corrections and comments
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3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
The phaseolin (phas) promoter drives copious production of transcripts encoding the protein phaseolin during seed embryogenesis but is silent in vegetative tissues, in which a nucleosome is positioned over its three-phased TATA boxes. Transition from the inactive state in transgenic Arabidopsis thaliana leaves was accomplished by ectopic expression of the transcription factor Phaseolus vulgaris ABI3-like factor (ALF) and application of abscisic acid (ABA). Placement of hemagglutinin-tagged ALF expression under the control of an estradiol-inducible promoter permitted chromatin immunoprecipitation analysis of chronological changes in histone modifications, notably increased acetylation of H3-K9 and H4-K12, as phas chromatin was remodeled (potentiated). A different array of changes, including acetylation of H3-K14 and methylation of H3-K4, was found to be associated with ABA-mediated activation. Thus, temporal separation of phas potentiation from activation revealed that histone H3 and H4 Lys residues are not globally hyperacetylated during phas expression. Whereas decreases in histone H3 and H4 levels were detected during ALF-mediated remodeling, slight increases occurred after ABA-mediated activation, suggesting the restoration of histone-phas interactions or the replacement of histones in the phas chromatin. The observed histone modifications provide insight into factors involved in the euchromatinization and activation of a plant gene and expand the evidence for histone code conservation among eukaryotes.
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