Evidence map›Paper›PMID 16325795›Full record

ArticleDevelopmental biology2006

Nucleoporins NPP-1, NPP-3, NPP-4, NPP-11 and NPP-13 are required for proper spindle orientation in C. elegans.

Aaron Schetter, Peter Askjaer, Fabio Piano, Iain Mattaj, Kenneth Kemphues

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Ultrastructure Expansion Microscopy applied tomicroPublication biology · 2024
    Article
  2. Review
  3. Imaging Fluorescent Nuclear Pore Complex Proteins in C. elegans.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  4. Decreased mechanotransduction prevents nuclear collapse in aProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Article
  6. Dissecting the eQTL Micro-Architecture inFrontiers in genetics · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Time-lapse microscopy of early embryogenesis in Caenorhabditis elegans.Journal of visualized experiments : JoVE · 2011
    Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Aaron SchetterDepartment of Molecular Biology and Genetics, Cornell University, 435 Biotechnology Building, Ithaca, NY 14853, USA.
Peter Askjaer
Fabio Piano
Iain Mattaj
Kenneth Kemphues
Cornell University · USEuropean Molecular Biology Laboratory · DENew York University · US

Funding

GENETIC ANALYSIS OF EARLY EMBRYOGENESIS IN C ELEGANSR01HD027689 · NICHD · CORNELL UNIVERSITY ITHACA · PI KEMPHUES, KENNETH J. · 1991 to 2005
$2.4M
NICHD NIH HHS HD27698NICHD NIH HHS R01 HD027689PHS HHS 6M07617
6 · The paper itself

Abstract

Nucleoporins are components of the nuclear pore, which is required for nucleo-cytoplasmic transport. We report a role for a subclass of nucleoporins in orienting the mitotic spindle in C. elegans embryos. RNAi-mediated depletion of any of five putative nucleoporins npp-1, npp-3, npp-4, npp-11, and npp-13 leads to indistinguishable spindle orientation defects. Transgenic worms expressing NPP-1::GFP or NPP-11::GFP show GFP localization at the nuclear envelope, consistent with their predicted function. NPP-1 interacts with the other nucleoporins in yeast two-hybrid assays, suggesting that the proteins affect spindle orientation by a common process. The failed orientation phenotype of npp-1(RNAi) is at least partially epistatic to the ectopic spindle rotation in the AB blastomere of par-3 mutant embryos. This suggests that NPP-1 contributes to the mechanics of spindle orientation. However, NPP-1 is also required for PAR-6 asymmetry at the two-cell stage, indicating that nucleoporins may be required to define cortical domains in the germ line blastomere P1. Nuclear envelope structure is abnormal in npp-1(RNAi) embryos, but the envelope maintains its integrity, and most nuclear proteins we assayed accumulate normally. These findings raise the possibility that these nucleoporins may have direct roles in orienting the mitotic spindle and the maintenance of cell polarity.

Indexed as

Gene Expression Regulation, DevelopmentalAdenosine TriphosphatasesAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell DifferentiationCell DivisionDNA, RecombinantDynactin ComplexFluorescent Antibody TechniqueMembrane ProteinsMicroscopy, ConfocalMicrotubule-Associated ProteinsModels, GeneticNuclear EnvelopeNuclear Pore Complex ProteinsAdenosine TriphosphatasesCaenorhabditis elegans ProteinsDNA, RecombinantDynactin ComplexMembrane ProteinsMicrotubule-Associated ProteinsNPP-3 protein, C elegansNuclear Pore Complex Proteinsooc-3 protein, C elegansOOC-5 protein, C elegans

Identifiers

PMID16325795
PMCPMC1405919
OpenAlexW2050177694

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.