Evidence map›Paper›PMID 16322107›Full record

ArticleGut2006

Helicobacter pylori outer membrane proteins and gastroduodenal disease.

Y Yamaoka, O Ojo, S Fujimoto, S Odenbreit, R Haas, O Gutierrez, H M T El-Zimaity, R Reddy, A Arnqvist, D Y Graham

Open access · greenAbstract read
In one paragraph

Article in Gut, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed, 4 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 4 syntheses or guidelines pooled it, 252 citations in OpenAlex.

  1. Pooled it
  2. Chemoprevention of gastric cancer development afterWorld journal of gastroenterology · 2020
    Pooled it
  3. Pooled it
  4. Pooled it
  5. Microbiology and molecular biology reviews : MMBR · 2026
    Review
  6. Article
  7. Narra J · 2025
    Article
  8. Article
  9. Frontiers in microbiology · 2025
    Review
  10. Evaluation of theAnti-cancer agents in medicinal chemistry · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Pathogens (Basel, Switzerland) · 2024
    Review
  15. Review
  16. Review
  17. Expression Assessment of theInternational journal of molecular and cellular medicine · 2023
    Article
  18. Article
  19. Host Cell Antimicrobial Responses againstInternational journal of molecular sciences · 2022
    Review
  20. Review

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Y YamaokaDepartment of Medicine, Michael E DeBakey Veterans Affairs Medical Center (111D), Houston, TX 77030, USA. yyamaoka@bcm.tmc.edu
O Ojo
S Fujimoto
S Odenbreit
R Haas
O Gutierrez
H M T El-Zimaity
R Reddy
A Arnqvist
D Y Graham
Michael E. DeBakey VA Medical Center · USLudwig-Maximilians-Universität München · DEUmeå University · SEUniversidad Nacional de Colombia · CO

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI FASIHA KANWAL · 2001 to 2026
$28.3M
REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS DK56338NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK062813NIDDK NIH HHS R01 DK62813
6 · The paper itself

Abstract

BACKGROUND AND

aimsA number of Helicobacter pylori outer membrane proteins (OMPs) undergo phase variations. This study examined the relation between OMP phase variations and clinical outcome.

methodsExpression of H pylori BabA, BabB, SabA, and OipA proteins was determined by immunoblot. Multiple regression analysis was performed to determine the relation among OMP expression, clinical outcome, and mucosal histology.

resultsH pylori were cultured from 200 patients (80 with gastritis, 80 with duodenal ulcer (DU), and 40 with gastric cancer). The most reliable results were obtained using cultures from single colonies of low passage number. Stability of expression with passage varied with OipA > BabA > BabB > SabA. OipA positive status was significantly associated with the presence of DU and gastric cancer, high H pylori density, and severe neutrophil infiltration. SabA positive status was associated with gastric cancer, intestinal metaplasia, and corpus atrophy, and negatively associated with DU and neutrophil infiltration. The Sydney system underestimated the prevalence of intestinal metaplasia/atrophy compared with systems using proximal and distal corpus biopsies. SabA expression dramatically decreased following exposure of H pylori to pH 5.0 for two hours.

conclusionsSabA expression frequently switched on or off, suggesting that SabA expression can rapidly respond to changing conditions in the stomach or in different regions of the stomach. SabA positive status was inversely related to the ability of the stomach to secrete acid, suggesting that its expression may be regulated by changes in acid secretion and/or in antigens expressed by the atrophic mucosa.

Indexed as

AdenocarcinomaBacterial Outer Membrane ProteinsBiopsyDuodenal UlcerFemaleGastric MucosaGastritisGastrointestinal DiseasesGenes, BacterialGenotypeHelicobacter InfectionsHelicobacter pyloriHumansHydrogen-Ion ConcentrationLinear ModelsMaleBacterial Outer Membrane Proteins

Identifiers

PMID16322107
PMCPMC1856239
OpenAlexW2121426096

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.