Evidence map›Paper›PMID 16321950›Full record

ArticleJournal of bacteriology2005

Genetic requirements for potassium ion-dependent colony spreading in Bacillus subtilis.

Rebecca F Kinsinger, Daniel B Kearns, Marina Hale, Ray Fall

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
  2. Movement of bacteria in the soil and the rhizosphere.Applied and environmental microbiology · 2025
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  5. MOB rules: Antibiotic Exposure Reprograms Metabolism to MobilizebioRxiv : the preprint server for biology · 2024
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  10. Review
  11. Review
  12. Key Impact of an Uncommon Plasmid onFrontiers in microbiology · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rebecca F KinsingerDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309-0215, USA.
Daniel B Kearns
Marina Hale
Ray Fall
University of Colorado Boulder · USHarvard University · US

Funding

Role of RNA Polymerase in Bacterial DifferentionR01GM018568 · NIGMS · HARVARD UNIVERSITY · PI LOSICK, RICHARD MARC · 1985 to 2018
$11.5M
Phospholipid-induced Motility in Bacillus cereus GroupR03AI055575 · NIAID · UNIVERSITY OF COLORADO AT BOULDER · PI FALL, R RAY · 2003 to 2004
$148k
Genetic analysis of Bacillus subtilis swarming motilityF32GM066612 · NIGMS · HARVARD UNIVERSITY · PI KEARNS, DANIEL B · 2002 to 2004
$109k
ROLE OF RNA POLYMERASE IN BACTERIAL DIFFERENTIATIONR37GM018568 · NIGMS · HARVARD UNIVERSITY · PI LOSICK, RICHARD MARC · 1990 to 1999
–
NIAID NIH HHS AI055575-01NIAID NIH HHS R03 AI055575NIGMS NIH HHS F32 GM066612NIGMS NIH HHS GM18568NIGMS NIH HHS GM66612NIGMS NIH HHS R01 GM018568NIGMS NIH HHS R37 GM018568
6 · The paper itself

Abstract

Undomesticated strains of Bacillus subtilis exhibit extensive colony spreading on certain soft agarose media: first the formation of dendritic clusters of cells, followed by spreading (pellicle-like) growth to cover the entire surface. These phases of colonization are dependent on the level of potassium ion (K(+)) but independent of flagella, as verified with a mutant with a hag gene replacement; this latter finding highlights the importance of sliding motility in colony spreading. Exploring the K(+) requirement, directed mutagenesis of the higher-affinity K(+) transporter KtrAB, but not the lower-affinity transporter KtrCD, was found to inhibit surface colonization unless sufficient KCl was added. To identify other genes involved in K(+)-dependent colony spreading, transposon insertion mutants in wild-type strain 3610 were screened. Disruption of genes for pyrimidine (pyrB) or purine (purD, purF, purH, purL, purM) biosynthetic pathways abolished the K(+)-dependent spreading phase. Consistent with a requirement for functional nucleic acid biosynthesis, disruption of purine synthesis with the folic acid antagonist sulfamethoxazole also inhibited spreading. Other transposon insertions disrupted acetoin biosynthesis (the alsS gene), acidifying the growth medium, glutamine synthetase (the glnA gene), and two surfactin biosynthetic genes (srfAA, srfAB). This work identified four classes of surface colonization mutants with defective (i) potassium transport, (ii) surfactin formation, (iii) growth rate or yield, or (iv) pH control. Overall, the ability of B. subtilis to colonize surfaces by spreading is highly dependent on balanced nucleotide biosynthesis and nutrient assimilation, which require sufficient K(+) ions, as well as growth conditions that promote sliding motility.

Indexed as

AcetoinAnti-Bacterial AgentsAspartate CarbamoyltransferaseBacillus subtilisBacterial ProteinsCarbon-Nitrogen Ligases with Glutamine as Amide-N-DonorCation Transport ProteinsCulture MediaDNA, BacterialDNA Transposable ElementsFlagellaGlutamate-Ammonia LigaseMembrane ProteinsMorphogenesisMovementMutagenesis, InsertionalAcetoinAnti-Bacterial AgentsAspartate CarbamoyltransferaseBacterial ProteinsCarbon-Nitrogen Ligases with Glutamine as Amide-N-DonorCation Transport ProteinsCulture MediaDNA, BacterialDNA Transposable ElementsGlutamate-Ammonia Ligaseglutamine synthetase IKtrB protein, BacteriaMembrane ProteinsPeptide SynthasesPotassiumSulfamethoxazolesurfactin synthetase

Identifiers

PMID16321950
PMCPMC1317027
OpenAlexW1979399494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.