Evidence map›Paper›PMID 16321012›Full record

ArticleOrganic letters2005

Synthesis of a 2'-Se-uridine phosphoramidite and its incorporation into oligonucleotides for structural study.

Jozef Salon, Guexiong Chen, Yoani Portilla, Markus W Germann, Zhen Huang

Abstract read
In one paragraph

Article in Organic letters, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jozef SalonDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA.
Guexiong Chen
Yoani Portilla
Markus W Germann
Zhen Huang

Funding

Se-Derivatization of Functional RNAs for Structure StudyR15GM069703 · NIGMS · BROOKLYN COLLEGE · PI HUANG, ZHEN · 2004 to 2004
$230k
NIGMS NIH HHS GM069703NIGMS NIH HHS R15 GM069703
6 · The paper itself

Abstract

[chemical reaction: see text]. We report here the synthesis of the 5'-[benzhydryloxybis(trimethylsilyloxy)]silyl-2'-methylseleno-2'-deoxyuridine phosphoramidite and its incorporation into oligonucleotides by solid-phase synthesis. The coupling yield of this phosphoramidite into oligonucleotides is higher than 99%. We also demonstrate that this 2'-methylselenophosphoramidite is compatible with the 5'-silyl-2'-ACE chemistry, for longer Se-RNA solid-phase synthesis. Our preliminary NMR study on the synthesized 2'-Se-DNA has revealed a U(Se)-A base pair and a duplex structure formation when its complementary strand was present.

Indexed as

DeoxyuridineMolecular StructureNuclear Magnetic Resonance, BiomolecularOligonucleotidesOrganophosphorus CompoundsOrganoselenium CompoundsUridine5'-(benzhydryloxybis(trimethylsilyloxy))silyl-2'-methylseleno-2'-deoxyuridine phosphoramiditeDeoxyuridineOligonucleotidesOrganophosphorus CompoundsOrganoselenium CompoundsUridineuridine phosphoramidite

Identifiers

PMID16321012
PMCPMC3596769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.