Evidence map›Paper›PMID 16319193›Full record

ArticleGenes & development2005

Targeting of cohesin by transcriptionally silent chromatin.

Chuang-Rung Chang, Ching-Shyi Wu, Yolanda Hom, Marc R Gartenberg

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Binding, sliding, and function of cohesin during transcriptional activation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Determinants of Sir2-Mediated, Silent Chromatin Cohesion.Molecular and cellular biology · 2016
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. The roles of cohesins in mitosis, meiosis, and human health and disease.Methods in molecular biology (Clifton, N.J.) · 2014
    Review
  17. Article
  18. Article
  19. Article
  20. Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chuang-Rung ChangDepartment of Pharmacology, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, Piscataway, 08854, USA.
Ching-Shyi Wu
Yolanda Hom
Marc R Gartenberg
Rutgers, The State University of New Jersey · USJohnson University · US

Funding

Cohesin in Chromosome Architecture and Transcriptional ControlR01GM051402 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI GARTENBERG, MARC R. · 1995 to 2022
$7.9M
CHROMOSOME ARCHITECTURER55GM051402 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI GARTENBERG, MARC R. · 1994 to 1994
–
NIGMS NIH HHS GM51402NIGMS NIH HHS R01 GM051402
6 · The paper itself

Abstract

Eukaryotic DNA replication produces sister chromatids that are linked together until anaphase by cohesin, a ring-shaped protein complex that is thought to act by embracing both chromatids. Cohesin is enriched at centromeres, as well as discrete sites along chromosome arms where transcription positions the complex between convergent gene pairs. A relationship between cohesin and Sir-mediated transcriptional silencing has also begun to emerge. Here we used fluorescence microscopy and site-specific recombination to characterize interactions between newly replicated copies of the silent HMR mating-type locus. HMR was tagged with lac-GFP and flanked by binding sites for an inducible site-specific recombinase. Excision of the locus in cells with sister chromatids produced two chromatin circles that remained associated with one another. Pairing of the circles required silent chromatin, cohesin, and the RSC chromatin-remodeling complex. Chromatin immunoprecipitation showed that targeting of cohesin to the locus is Sir-dependent, and functional tests showed that silent chromatin acts in a continuous fashion to maintain cohesion. Remarkably, loss of silencing led to loss of cohesin from linear chromosomal templates but not from excised chromatin circles. The results are consistent with a model in which cohesin binds silent chromatin via topological linkage to individual chromatids.

Indexed as

Cell Cycle ProteinsChromatidsChromatinChromosomal Proteins, Non-HistoneChromosomes, FungalCohesinsDNA ReplicationFungal ProteinsGene Expression Regulation, FungalGene SilencingGenes, Mating Type, FungalNuclear ProteinsQuantitative Trait LociSaccharomyces cerevisiaeCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsFungal ProteinsNuclear Proteins

Identifiers

PMID16319193
PMCPMC1315406
OpenAlexW2136251904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.