Evidence map›Paper›PMID 16319082›Full record

ArticleGlycobiology2006

Helicobacter pylori and toll-like receptor agonists induce syndecan-4 expression in an NF-kappaB-dependent manner.

Michael F Smith, Jennifer Novotny, Virginia S Carl, Laurey D Comeau

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Adherence ofFrontiers in immunology · 2019
    Article
  5. Article
  6. Article
  7. HIF-1-PHD2 axis controls expression of syndecan 4 in nucleus pulposus cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2014
    Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael F SmithDepartment of Medicine, University of Virginia Health System, Charlottesville, VA 22908-0708, USA. mfs3k@virginia.edu
Jennifer Novotny
Virginia S Carl
Laurey D Comeau
University of Virginia Health System · US

Funding

IDENTIFICATION OF LPS-INDUCED SIGNALING MECHANISMSR01AI034358 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI SMITH, MICHAEL F · 2000 to 2004
$1.5M
NIAID NIH HHS R01 AI034358NIAID NIH HHS R01 AI034358-10NIAID NIH HHS R01-AI34358
6 · The paper itself

Abstract

The syndecans are a family of transmembrane heparan sulfate proteoglycans (HSPG) that have been implicated in a wide variety of biological functions including the regulation of growth factor signaling, adhesion, tumorigenesis, and inflammation. In the current studies, we examined the regulation of syndecan-4 gene expression in gastric epithelial cells and macrophages in response to infection with live Helicobacter pylori and purified toll-like receptor (TLR) agonists. H. pylori, PAM3CSK4 (a TLR2 agonist), and Escherichia coli flagellin (a TLR5 agonist) all induced the rapid expression of syndecan-4 mRNA in MKN45 gastric epithelial cells. Similarly, lipopolysaccharide (LPS) (a TLR4 agonist) also induced the expression of syndecan-4 in macrophages. The H. pylori- and TLR-induced increase in syndecan-4 mRNA was blocked by the proteosome inhibitor MG-132 suggesting a role for nuclear factor kappaB (NF-kappaB) in the regulation of syndecan-4 gene expression. An 895-bp fragment of the human syndecan-4 promoter was cloned upstream of the luciferase reporter. When transfected into MKN45 cells, the activity of this promoter was inducible by H. pylori and TLR agonists. Inducible activity of the syndecan-4 promoter was blocked by cotransfection with a dominant negative IkappaBalpha expression plasmid. Electrophoretic mobility shift assays (EMSA) demonstrated the presence of a highly conserved NF-kappaB-binding site. Mutation of this site within the context of the full-length syndecan-4 promoter resulted in a complete loss of responsiveness to H. pylori and TLR agonists. These results thus demonstrate that the response of the syndecan-4 gene to infectious agents, or their products, is a direct result of NF-kappaB binding to the promoter and induction of de novo transcription.

Indexed as

AnimalsBinding SitesCell LineEpithelial CellsGastric MucosaGene Expression RegulationHelicobacter pyloriHumansLipopolysaccharidesMacrophagesMembrane GlycoproteinsMiceMutationNF-kappa BPromoter Regions, GeneticProteoglycansLipopolysaccharidesMembrane GlycoproteinsNF-kappa BProteoglycansRNA, MessengerSDC4 protein, humanSdc4 protein, mouseSyndecan-4Toll-Like Receptors

Identifiers

PMID16319082
PMCPMC1370916
OpenAlexW2096298530

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.