Evidence map›Paper›PMID 16316975›Full record

ArticleThe Journal of general physiology2005

Separate ion pathways in a Cl-/H+ exchanger.

Alessio Accardi, Michael Walden, Wang Nguitragool, Hariharan Jayaram, Carole Williams, Christopher Miller

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 208 citations in OpenAlex.

  1. Article
  2. Secreting salt glands constrain cuticle fracture to enhance desalination efficiency.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  4. Article
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  6. Structural basis of pH-dependent activation in a CLC transporter.Nature structural & molecular biology · 2024
    Article
  7. Fluoride Transport and Inhibition Across CLC Transporters.Handbook of experimental pharmacology · 2024
    Article
  8. The Role of Chloride Channels in Plant Responses to NaCl.International journal of molecular sciences · 2023
    Review
  9. Membrane defects as a generalized driving force for membrane protein interactions.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Chloride Channel Family in the EuhalophyteInternational journal of molecular sciences · 2023
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Alessio AccardiDepartment of Biochemistry, Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02454, USA.
Michael Walden
Wang Nguitragool
Hariharan Jayaram
Carole Williams
Christopher Miller
Howard Hughes Medical Institute · US

Funding

LIPOSOME-PATCH RECORDING O RECONSTITUTED ION CHANNELSR01GM031768 · NIGMS · BRANDEIS UNIVERSITY · PI MILLER, CHRISTOPHER · 1985 to 2009
$2.1M
BASIC MECHANISMS OF ION CHANNEL FUNCTIONR37GM031768 · NIGMS · BRANDEIS UNIVERSITY · PI MILLER, CHRISTOPHER · 1991 to 2000
$214k
NIGMS NIH HHS GM-31768NIGMS NIH HHS R01 GM031768NIGMS NIH HHS R37 GM031768
6 · The paper itself

Abstract

CLC-ec1 is a prokaryotic CLC-type Cl(-)/H+ exchange transporter. Little is known about the mechanism of H+ coupling to Cl-. A critical glutamate residue, E148, was previously shown to be required for Cl(-)/H+ exchange by mediating proton transfer between the protein and the extracellular solution. To test whether an analogous H+ acceptor exists near the intracellular side of the protein, we performed a mutagenesis scan of inward-facing carboxyl-bearing residues and identified E203 as the unique residue whose neutralization abolishes H+ coupling to Cl- transport. Glutamate at this position is strictly conserved in all known CLCs of the transporter subclass, while valine is always found here in CLC channels. The x-ray crystal structure of the E203Q mutant is similar to that of the wild-type protein. Cl- transport rate in E203Q is inhibited at neutral pH, and the double mutant, E148A/E203Q, shows maximal Cl- transport, independent of pH, as does the single mutant E148A. The results argue that substrate exchange by CLC-ec1 involves two separate but partially overlapping permeation pathways, one for Cl- and one for H+. These pathways are congruent from the protein's extracellular surface to E148, and they diverge beyond this point toward the intracellular side. This picture demands a transport mechanism fundamentally different from familiar alternating-access schemes.

Indexed as

Amino Acid SequenceChloride ChannelsChloridesCrystallographyEscherichia coliHydrogen-Ion ConcentrationIon TransportMolecular Sequence DataMutationProtein ConformationProton PumpsChloride ChannelsChloridesProton Pumps

Identifiers

PMID16316975
PMCPMC2266597
OpenAlexW1965620778

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.