ArticleJournal of molecular evolution2005
Evidence for Hox gene duplication in rainbow trout (Oncorhynchus mykiss): a tetraploid model species.
Article in Journal of molecular evolution, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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24 citing papers in PubMed, 85 citations in OpenAlex.
- Further evidence for paternal DNA transmission in gynogenetic grass carp.Science China. Life sciences · 2020Article
- Hox genes reveal variations in the genomic DNA of allotetraploid hybrids derived from Carassius auratus red var. (female) × Cyprinus carpio L. (male).BMC genetics · 2020Article
- Article
- A SNP Based Linkage Map of the Arctic Charr (G3 (Bethesda, Md.) · 2017Article
- Distinct functions of two olfactory marker protein genes derived from teleost-specific whole genome duplication.BMC evolutionary biology · 2015Article
- Identification and de novo sequencing of housekeeping genes appropriate for gene expression analyses in farmed maraena whitefish (Coregonus maraena) during crowding stress.Fish physiology and biochemistry · 2015Article
- Differential gene susceptibility to sperm DNA damage: analysis of developmental key genes in trout.PloS one · 2014Article
- Evolution of Hox gene clusters in deuterostomes.BMC developmental biology · 2013Review
- Isolation and molecular characterization of Rem2 isoforms in the rainbow trout (Oncorhynchus mykiss): Tissue and central nervous system expression.Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology · 2012Article
- Article
- Calcium-activated potassium (BK) channels are encoded by duplicate slo1 genes in teleost fishes.Molecular biology and evolution · 2009Article
- Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout.BMC genomics · 2009Article
- Hox cluster duplication in the basal teleost Hiodon alosoides (Osteoglossomorpha).Theory in biosciences = Theorie in den Biowissenschaften · 2009Article
- Aneuploid sperm formation in rainbow trout exposed to the environmental estrogen 17{alpha}-ethynylestradiol.Proceedings of the National Academy of Sciences of the United States of America · 2008Article
- Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon).BMC genomics · 2008Article
- Article
- The origin and evolution of a unisexual hybrid: Poecilia formosa.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2008Article
- Evolution of receptors for growth hormone and somatolactin in fish and land vertebrates: lessons from the lungfish and sturgeon orthologues.Journal of molecular evolution · 2007Article
- HoxPred: automated classification of Hox proteins using combinations of generalised profiles.BMC bioinformatics · 2007Article
- Quantitative trait loci for body weight, condition factor and age at sexual maturation in Arctic charr (Salvelinus alpinus): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar).Molecular genetics and genomics : MGG · 2007Article
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We examined the genomic organization of Hox genes in rainbow trout (Oncorhynchus mykiss), a tetraploid teleost derivative species, in order to test models of presumptive genomic duplications during vertebrate evolution. Thirteen putative clusters were localized in the current rainbow trout genetic map; however, analysis of the sequence data suggests the presence of at least 14 Hox clusters. Many duplicated genes appear to have been retained in the genome and share a high percentage of amino acid similarity with one another. We characterized two Hox genes located within the HoxCb cluster that may have been lost independently in other teleost species studied to date. Finally, we identified conserved syntenic blocks between salmonids and human, and provide data supporting two new linkage group homeologies (i.e., RT-3/16, RT-12/29) and three previously described homeologies (RT-2/9, RT-17/22, and RT-27/31) in rainbow trout.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.