Evidence map›Paper›PMID 16315106›Full record

ArticleJournal of molecular evolution2005

Evolutionary relationships and protein domain architecture in an expanded calpain superfamily in kinetoplastid parasites.

Klaus Ersfeld, Helen Barraclough, Keith Gull

Abstract read
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Article in Journal of molecular evolution, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Identification of a conserved gene family with an essential role inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. An inclusive assessment of apoptosis mechanisms inCurrent research in parasitology & vector-borne diseases · 2025
    Review
  4. Identification of novel compounds againstComputational and structural biotechnology journal · 2025
    Article
  5. Susceptibility ofTropical medicine and infectious disease · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. The Use of AlphaFold forFrontiers in cellular and infection microbiology · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Cell death in Leishmania.Parasite (Paris, France) · 2019
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Klaus ErsfeldDepartment of Biological Sciences, University of Hull, Hull, HU6 7RX, UK. k.ersfeld@hull.ac.uk
Helen Barraclough
Keith Gull

Funding

AFRICAN TRYPANOSOME GENOME SEQUENCINGU01AI043062 · NIAID · INSTITUTE FOR GENOMIC RESEARCH · PI EL-SAYED, NAJIB M. · 2000 to 2003
$2.5M
AFRICAN TRYPANOSOME GENOME SEQUENCINGR01AI043062 · NIAID · INSTITUTE FOR GENOMIC RESEARCH · PI EL-SAYED, NAJIB M. · 1998 to 1999
–
NIAID NIH HHS AI043062Wellcome Trust
6 · The paper itself

Abstract

Employing whole-genome analysis we have characterized a large family of genes coding for calpain-related proteins in three kinetoplastid parasites. We have defined a total of 18 calpain-like sequences in Trypanosoma brucei, 27 in Leishmania major, and 24 in Trypanosoma cruzi. Sequence characterization revealed a well-conserved protease domain in most proteins, although residues critical for catalytic activity were frequently altered. Many of the proteins contain a novel N-terminal sequence motif unique to kinetoplastids. Furthermore, 24 of the sequences contain N-terminal fatty acid acylation motifs indicating association of these proteins with intracellular membranes. This extended family of proteins also includes a group of sequences that completely lack a protease domain but is specifically related to other kinetoplastid calpain-related proteins by a highly conserved N-terminal domain and by genomic organization. All sequences lack the C-terminal calmodulin-related calcium-binding domain typical of most mammalian calpains. Our analysis emphasizes the highly modular structure of calpains and calpain-like proteins, suggesting that they are involved in diverse cellular functions. The discovery of this surprisingly large family of calpain-like proteins in lower eukaryotes that combines novel and conserved sequence modules contributes to our understanding of the evolution of this abundant protein family.

Indexed as

Evolution, MolecularAmino Acid MotifsAmino Acid SequenceAnimalsCalpainDatabases, ProteinLeishmania majorMolecular Sequence DataPhylogenyProtein Structure, TertiarySequence AlignmentSequence Homology, Amino AcidTrypanosoma brucei bruceiTrypanosoma cruziCalpain

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.