Evidence map›Paper›PMID 16314305›Full record

ArticleNucleic acids research2005

Lack of MSH2 involvement differentiates V(D)J recombination from other non-homologous end joining events.

Mani Larijani, Ahmad Zaheen, Darina Frieder, Yuxun Wang, Gillian E Wu, Winfried Edelmann, Alberto Martin

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Twelve exonic variants in theFrontiers in genetics · 2022
    Article
  3. Article
  4. Article
  5. Msh2-dependent DNA repair mitigates a unique susceptibility of B cell progenitors to c-Myc-induced lymphomas.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mani LarijaniDepartment of Immunology, University of Toronto, Medical Sciences Building 5265, Toronto, Canada, M5S 1A8. mani.larijani@utoronto.ca
Ahmad Zaheen
Darina Frieder
Yuxun Wang
Gillian E Wu
Winfried Edelmann
Alberto Martin
University of Toronto · CA

Funding

DNA MISMATCH REPAIR AND CANCER IN MURINE MODELSR01CA076329 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 1998 to 2017
$6.9M
NCI NIH HHS CA76329NCI NIH HHS R01 CA076329
6 · The paper itself

Abstract

V(D)J recombination and class switch recombination are the two DNA rearrangement events used to diversify the mouse and human antibody repertoires. While their double strand breaks (DSBs) are initiated by different mechanisms, both processes use non-homologous end joining (NHEJ) in the repair phase. DNA mismatch repair elements (MSH2/MSH6) have been implicated in the repair of class switch junctions as well as other DNA DSBs that proceed through NHEJ. MSH2 has also been implicated in the regulation of factors such as ATM and the MRN (Mre11, Rad50, Nbs1) complex, which are involved in V(D)J recombination. These findings led us to examine the role of MSH2 in V(D)J repair. Using MSH2-/- and MSH2+/+ mice and cell lines, we show here that all pathways involving MSH2 are dispensable for the generation of an intact pre-immune repertoire by V(D)J recombination. In contrast to switch junctions and other DSBs, the usage of terminal homology in V(D)J junctions is not influenced by MSH2. Thus, whether the repair complex for V(D)J recombination is of a canonical NHEJ type or a separate microhomology-mediated-end joining (MMEJ) type, it does not involve MSH2. This highlights a distinction between the repair of V(D)J recombination and other NHEJ reactions.

Indexed as

Gene Rearrangement, B-LymphocyteAnimalsBase SequenceBone Marrow CellsCell LineDNA RepairImmunoglobulin FragmentsImmunoglobulin Joining RegionImmunoglobulin Variable RegionMiceMice, KnockoutMutS Homolog 2 ProteinRecombination, GeneticImmunoglobulin FragmentsImmunoglobulin Joining RegionImmunoglobulin Variable RegionMsh2 protein, mouseMutS Homolog 2 Protein

Identifiers

PMID16314305
PMCPMC1297709
OpenAlexW2010674102

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.