Evidence map›Paper›PMID 16314301›Full record

ArticleNucleic acids research2005

The genetic map and comparative analysis with the physical map of Trypanosoma brucei.

Annette MacLeod, Alison Tweedie, Sarah McLellan, Sonya Taylor, Neil Hall, Matthew Berriman, Najib M El-Sayed, Michelle Hope, C Michael R Turner, Andy Tait

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 58 citations in OpenAlex.

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  4. Genes · 2021
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Annette MacLeodWellcome Centre for Molecular Parasitology, Anderson College Complex, University of Glasgow, 56 Dumbarton Road, Glasgow G11 6NU, UK. gvwa08@udcf.gla.ac.uk
Alison Tweedie
Sarah McLellan
Sonya Taylor
Neil Hall
Matthew Berriman
Najib M El-Sayed
Michelle Hope
C Michael R Turner
Andy Tait
University of Glasgow · GB

Funding

AFRICAN TRYPANOSOME GENOME SEQUENCINGU01AI043062 · NIAID · INSTITUTE FOR GENOMIC RESEARCH · PI EL-SAYED, NAJIB M. · 2000 to 2003
$2.5M
AFRICAN TRYPANOSOME GENOME SEQUENCINGR01AI043062 · NIAID · INSTITUTE FOR GENOMIC RESEARCH · PI EL-SAYED, NAJIB M. · 1998 to 1999
–
NIAID NIH HHS R01 AI043062NIAID NIH HHS U01 AI043062Wellcome Trust
6 · The paper itself

Abstract

Trypanosoma brucei is the causative agent of African sleeping sickness in humans and contributes to the debilitating disease 'Nagana' in cattle. To date we know little about the genes that determine drug resistance, host specificity, pathogenesis and virulence in these parasites. The availability of the complete genome sequence and the ability of the parasite to undergo genetic exchange have allowed genetic investigations into this parasite and here we report the first genetic map of T.brucei for the genome reference stock TREU 927, comprising of 182 markers and 11 major linkage groups, that correspond to the 11 previously identified chromosomes. The genetic map provides 90% probability of a marker being 11 cM from any given locus. Its comparison to the available physical map has revealed the average physical size of a recombination unit to be 15.6 Kb/cM. The genetic map coupled with the genome sequence and the ability to undertake crosses presents a new approach to identifying genes relevant to the disease and its prevention in this important pathogen through forward genetic analysis and positional cloning.

Indexed as

Genome, ProtozoanAnimalsChromosome MappingChromosomesGenetic LinkagePhysical Chromosome MappingTrypanosoma brucei brucei

Identifiers

PMID16314301
PMCPMC1297707
OpenAlexW2154534981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.