Evidence map›Paper›PMID 16313609›Full record

ArticleMolecular microbiology2005

Bacterial metal detectors.

Susan K Buchanan

Abstract read
In one paragraph

Article in Molecular microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Comparison ofEpigenomes · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Susan K BuchananLaboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Department of Health and Human Services, Bethesda, MD 20892, USA. skbuchan@helix.nih.gov

Funding

Structure Determination Of Outer Membrane Iron TransportZ01DK011003 · NIDDK · DIABETES, DIGESTIVE, KIDNEY DISEASES · PI BUCHANAN, SUSAN K. · 2002 to 2006
–
Intramural NIH HHSNIDDK NIH HHS Z01 DK011003-04
6 · The paper itself

Abstract

Gram negative bacteria can detect environmental iron using outer membrane transporters (OMTs), and then regulate certain transport genes to take advantage of a readily available iron source. This process begins with an iron complex being bound by an OMT, and results in a signal being sent across the outer membrane, the periplasmic space, and the inner membrane, to a sigma factor that interacts with RNA polymerase and initiates transcription of relevant genes. Many of the interactions contributing to signalling have been observed by genetic and biochemical studies, but structural studies, which potentially show these interactions in molecular detail, have been limited. In this issue, Garcia-Herrero and Vogel describe an NMR structure of the periplasmic domain of an OMT, which had not been seen in previous X-ray crystal structures. This domain transmits the 'iron availability' signal to the next protein in the signal transduction cascade, which sits in the inner membrane and extends into the periplasm. The new structure extends our knowledge of transporter architecture and suggests how signalling may occur across the outer membrane.

Indexed as

Bacterial Outer Membrane ProteinsGene Expression Regulation, BacterialSignal TransductionBacterial ProteinsBiological TransportEscherichia coli ProteinsGram-Negative BacteriaIronMembrane ProteinsMembrane Transport ProteinsModels, MolecularReceptors, Cell SurfaceRepressor ProteinsSiderophoresSigma FactorBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coli ProteinsFecA protein, E coliFecR protein, E coliferric uptake regulating proteins, bacterialIronMembrane ProteinsMembrane Transport ProteinsReceptors, Cell SurfaceRepressor ProteinsSiderophoresSigma FactortonB protein, Bacteria

Identifiers

PMID16313609
PMCPMC1343523

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.