Evidence map›Paper›PMID 16309705›Full record

ArticleJournal of molecular biology2006

Effect of hsp70 chaperone on the folding and misfolding of polypeptides modeling an elongating protein chain.

Neşe Kurt, Senapathy Rajagopalan, Silvia Cavagnero

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Hsp70 biases the folding pathways of client proteins.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  8. Article
  9. Article
  10. Transient interactions of a slow-folding protein with the Hsp70 chaperone machinery.Protein science : a publication of the Protein Society · 2012
    Article
  11. Article
  12. Conformational dynamics of the molecular chaperone Hsp90.Quarterly reviews of biophysics · 2011
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Neşe KurtDepartment of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI 53706, USA.
Senapathy Rajagopalan
Silvia Cavagnero
University of Wisconsin–Madison · US

Funding

Polypeptide Conformation and Interaction with Hsp70R01GM068535 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI CAVAGNERO, SILVIA · 2004 to 2009
$1.5M
NIGMS NIH HHS GM068535-01A1NIGMS NIH HHS R01 GM068535
6 · The paper itself

Abstract

Virtually nothing is known about the interaction of co-translationally active chaperones with nascent polypeptides and the resulting effects on peptide conformation and folding. We have explored this issue by NMR analysis of apomyoglobin N-terminal fragments of increasing length, taken as models for different stages of protein biosynthesis, in the absence and presence of the substrate binding domain of Escherichia coli Hsp70, DnaK-beta. The incomplete polypeptides misfold and self-associate under refolding conditions. In the presence of DnaK-beta, however, formation of the original self-associated species is completely or partially prevented. Chaperone interaction with incomplete protein chains promotes a globally unfolded dynamic DnaK-beta-bound state, which becomes folding-competent only upon incorporation of the residues corresponding to the C-terminal H helix. The chaperone does not bind the full-length protein at equilibrium. However, its presence strongly disfavors the kinetic accessibility of misfolding side-routes available to the full-length chain. This work supports the role of DnaK as a "holder" for incomplete N-terminal polypeptides. However, as the chain approaches its full-length status, the tendency to intramolecularly bury non-polar surface efficiently outcompetes chaperone binding. Under these conditions, DnaK serves as a "folding enhancer" by supporting folding of a population of otherwise folding-incompetent full-length protein chains.

Indexed as

Protein BiosynthesisProtein FoldingApoproteinsEscherichia coliEscherichia coli ProteinsHSP70 Heat-Shock ProteinsKineticsMagnetic Resonance SpectroscopyMyoglobinPeptide FragmentsPeptidesProtein BindingThermodynamicsapomyoglobinApoproteinsdnaK protein, E coliEscherichia coli ProteinsHSP70 Heat-Shock ProteinsMyoglobinPeptide FragmentsPeptides

Identifiers

PMID16309705
PMCPMC1570398
OpenAlexW2065432043

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.