Evidence map›Paper›PMID 16307370›Full record

ArticlePlant molecular biology2005

In vitro and in planta interaction evidence between Nicotiana tabacum thaumatin-like protein 1 (TLP1) and cucumber mosaic virus proteins.

Min Jung Kim, Byung-Kook Ham, Hwa Ran Kim, In-Ju Lee, Young Jin Kim, Ki Hyun Ryu, Young In Park, Kyung-Hee Paek

Abstract read
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In one paragraph

Article in Plant molecular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Min Jung KimSchool of Life Sciences and Biotechnology, Korea University, 1, 5-ga, Anam-dong, 136-701, Seoul, Sungbuk-gu, Republic of Korea.
Byung-Kook Ham
Hwa Ran Kim
In-Ju Lee
Young Jin Kim
Ki Hyun Ryu
Young In Park
Kyung-Hee Paek
Korea University · KRSeoul Women's University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using a yeast two-hybrid system, we identified a plant cellular factor that interacts with the proteins of the Cucumber mosaic virus (CMV). Initially 14 candidate genes were isolated from Nicotiana tabacum, using a full-length CMV 1a gene as bait. Among the candidate genes, two were encoding thaumatin-like proteins (TLP), and were designated as Nicotiana tabacum thaumatin-like protein 1 (NtTLP1). Consistent with this observation, recombinant GST-NtTLP1 protein, which was expressed and purified in E. coli, bound tightly to CMV 1a in vitro. In planta interaction was also verified via co-immunoprecipitation. Additionally, NtTLP1 specifically interacted with the CMV movement-related proteins, movement protein and coat protein, in yeast. Real-time quantitative reverse transcription-polymerase chain reaction (RT-PCR) analysis showed that the expression of NtTLP1 increased as the result of CMV inoculation.

Indexed as

Gene Expression Regulation, PlantArabidopsis Proteinsbeta-GalactosidaseBlotting, SouthernCloning, MolecularCucumovirusDNA, ComplementaryElectrophoresis, Polyacrylamide GelGenes, PlantGenetic VectorsGlutathioneGlutathione TransferaseGreen Fluorescent ProteinsImmunoprecipitationIn Vitro TechniquesMicroscopy, FluorescenceArabidopsis ProteinsATLP-1 protein, Arabidopsisbeta-GalactosidaseDNA, ComplementaryGlutathioneGlutathione TransferaseGreen Fluorescent ProteinsPlant ProteinsPolyethylene GlycolsRecombinant ProteinsRNA

Identifiers

PMID16307370
OpenAlexW1988179384

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.